U.S. flag

An official website of the United States government

GH13793p [Drosophila melanogaster]

GenBank: AAL13595.1

Identical Proteins FASTA Graphics 

LOCUS       AAL13595                 933 aa            linear   INV 16-OCT-2001
DEFINITION  GH13793p [Drosophila melanogaster].
ACCESSION   AAL13595
VERSION     AAL13595.1
DBSOURCE    accession AY058366.1
KEYWORDS    .
SOURCE      Drosophila melanogaster (fruit fly)
  ORGANISM  Drosophila melanogaster
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
REFERENCE   1  (residues 1 to 933)
  AUTHORS   Stapleton,M., Brokstein,P., Hong,L., Agbayani,A., Carlson,J.,
            Champe,M., Chavez,C., Dorsett,V., Farfan,D., Frise,E., George,R.,
            Gonzalez,M., Guarin,H., Li,P., Liao,G., Miranda,A., Mungall,C.J.,
            Nunoo,J., Pacleb,J., Paragas,V., Park,S., Phouanenavong,S., Wan,K.,
            Yu,C., Lewis,S.E., Rubin,G.M. and Celniker,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-OCT-2001) Berkeley Drosophila Genome Project,
            Lawrence Berkeley National Laboratory, One Cyclotron Road,
            Berkeley, CA 94720, USA
COMMENT     Sequence submitted by:
            Berkeley Drosophila Genome Project
            Lawrence Berkeley National Laboratory
            Berkeley, CA 94720
            This clone was sequenced as part of a high-throughput process to
            sequence clones from Drosophila Gene Collection 1 (Rubin et al.,
            Science 2000). The sequence has been subjected to integrity checks
            for sequence accuracy, presence of a polyA tail and contiguity
            within 100 kb in the genome. Thus we believe the sequence to
            reflect accurately this particular cDNA clone.  However, there are
            artifacts associated with the generation of cDNA clones that may
            have not been detected in our initial analyses such as internal
            priming, priming from contaminating genomic DNA, retained introns
            due to reverse transcription of unspliced precursor RNAs, and
            reverse transcriptase errors that result in single base changes.
            For further information about this sequence, including its location
            and relationship to other sequences, please visit our Web site
            (http://fruitfly.berkeley.edu) or send email to
            cdna@fruitfly.berkeley.edu.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..933
                     /organism="Drosophila melanogaster"
                     /strain="y; cn bw sp"
                     /db_xref="taxon:7227"
                     /map="50E7-50E8"
     Protein         1..933
                     /product="GH13793p"
     Region          259..533
                     /region_name="DLP_1"
                     /note="Dynamin_like protein family includes dynamins and
                     Mx proteins; cd08771"
                     /db_xref="CDD:206738"
     Site            267..274
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206738"
     Site            order(268,270..275,288..289,295,370,440,442..443,473..477,
                     480)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206738"
     Site            order(269..270,374,387,412,414,416..419,421..422,443,
                     445..448,476..478)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:206738"
     Site            295
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206738"
     Site            299..301
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206738"
     Site            370..373
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206738"
     Site            order(372..373,403..404)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206738"
     Site            439..442
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206738"
     Site            473..475
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206738"
     Region          590..933
                     /region_name="OPA1_C"
                     /note="Dynamin-like GTPase OPA1 C-terminal; pfam19434"
                     /db_xref="CDD:466080"
     CDS             1..933
                     /gene="CG8479"
                     /coded_by="AY058366.1:110..2911"
                     /note="Longest ORF"
                     /db_xref="FLYBASE:FBgn0033914"
ORIGIN      
        1 mlriyqntyr rtarkavvys tkvaccnhst lcgitshprr aqdsgssssn grhrgheefl
       61 lagnpargwq mpppsrgygm lvvrilrgal klryivlgga igggvslskk yeewkdglpn
      121 fkwledampq gerwsqfsrn lievgslvkn aievakddlk akttvaalgi tsdesrkkye
      181 klqsqvetlq teimnvqiky qkelekmeke nrelrqqyli lktnkkttak kikkslidmy
      241 sevldelsgy dtgytmadhl prvvvvgdqs sgktsvlesi akarifprgs gemmtrapvk
      301 vtlaegpyhv aqfrdsdrey dltkesdlqd lrrdvefrmk asvrggktvs neviamtvkg
      361 pglqrmvlvd lpgiistmtv dmasdtkdsi hqmtkhymsn pnaiilciqd gsvdaersnv
      421 tdlvmqcdpl grrtifvltk vdlaeeladp drirkilsgk lfpmkalgyy avvtgrgrkd
      481 dsidairqye edffknsklf hrrgvimphq vtsrnlslav sdrfwkmvre tieqqadafk
      541 atrfnletew knnfprlres grdelfdkak geildevvtl sqisakkwdd alstklwekl
      601 snyvfesiyl paaqsgsqns fntmvdiklr qwaeqalpak sveagwealq qefislmers
      661 kkaqdhdgif dqlksavvde airrhswedk aidmlrviql ntledrfvhd kqewdsavkf
      721 lessvnaklv qteetlaqmf gpgqmrrith wqyltqdqqk rrsvkneldk ilkndtkhlp
      781 tlthdelttv rknlqrdnvd vdtdyirqtw fpvyrkhflq qalqrakdcr kayylytqqg
      841 aeceiscsdv vlfwriqqvi kitgnalrqq vinrearrld keikavldef sddeekkgyl
      901 ltgkrvllae elikvrqiqe kleefinsln qek
//
Feature
Display: FASTA GenBank Help
Details

Supplemental Content

Change region shown

Customize view

Reference sequence information

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
External link. Please review our privacy policy.