LOCUS AAI66914 391 aa linear ROD 26-JUL-2016
DEFINITION Stim1 protein, partial [Rattus norvegicus].
ACCESSION AAI66914
VERSION AAI66914.1
DBSOURCE accession BC166914.1
KEYWORDS .
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (residues 1 to 391)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (residues 1 to 391)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAY-2008) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: John C. Marshall, M.D., Ph.D
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 74 Row: c Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..391
/organism="Rattus norvegicus"
/db_xref="taxon:10116"
/clone="IMAGE:6891199"
/tissue_type="Pituitary gland, anterior, rat"
/clone_lib="NICHD_Rr_Pit1"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
Protein 1..>391
/product="Stim1 protein"
Region 128..201
/region_name="SAM_STIM1"
/note="SAM domain of STIM1 subfamily proteins; cd09573"
/db_xref="CDD:188972"
Site order(132,152,163,179,192,198)
/site_type="other"
/note="oligomer interface [polypeptide binding]"
/db_xref="CDD:188972"
Region <251..>337
/region_name="Smc"
/note="Chromosome segregation ATPase Smc [Cell cycle
control, cell division, chromosome partitioning]; COG1196"
/db_xref="CDD:440809"
Region 342..>381
/region_name="SOAR"
/note="STIM1 Orai1-activating region; pfam16533"
/db_xref="CDD:465164"
CDS 1..391
/gene="Stim1"
/coded_by="BC166914.1:36..>1209"
/db_xref="GeneID:361618"
/db_xref="RGD:1306831"
ORIGIN
1 mdvcarlalw llwglllhqg qslshshsek ntgassgats eesteaefcr idkplchsed
61 eklsfeavrn ihklmdddan gdvdveesde flredlnyhd ptvkhstfhg edklisvedl
121 wkawkasevy nwtvdeviqw lityvelpqy eetfrklqlt ghamprlavt nttmtgtvlk
181 mtdrshrqkl qlkaldtvlf gpplltrhnh lkdfmlvvsi vigvggcwfa yiqnryskeh
241 mkkmmkdleg lhraeqslhd lqerlhkaqe ehrtvevekv hlekklrdei nlakqeaqrl
301 kelregtene rsrqkyaeee leqvrealrk aekeleshss wyapealqkw lqlthevevq
361 yynikkqnae rqllvakega ekkkkkkkkk k
//