U.S. flag

An official website of the United States government

Stim1 protein, partial [Rattus norvegicus]

GenBank: AAI66914.1

Identical Proteins FASTA Graphics 

LOCUS       AAI66914                 391 aa            linear   ROD 26-JUL-2016
DEFINITION  Stim1 protein, partial [Rattus norvegicus].
ACCESSION   AAI66914
VERSION     AAI66914.1
DBSOURCE    accession BC166914.1
KEYWORDS    .
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 391)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (residues 1 to 391)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAY-2008) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: John C. Marshall, M.D., Ph.D
            cDNA Library Preparation: CLONTECH Laboratories, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 74 Row: c Column: 4
            This clone was selected for full length sequencing because it
            passed the following selection criteria: Similarity but not
            identity to protein.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Rattus norvegicus"
                     /db_xref="taxon:10116"
                     /clone="IMAGE:6891199"
                     /tissue_type="Pituitary gland, anterior, rat"
                     /clone_lib="NICHD_Rr_Pit1"
                     /lab_host="DH10B"
                     /note="Vector: pDNR-LIB"
     Protein         1..>391
                     /product="Stim1 protein"
     Region          128..201
                     /region_name="SAM_STIM1"
                     /note="SAM domain of STIM1 subfamily proteins; cd09573"
                     /db_xref="CDD:188972"
     Site            order(132,152,163,179,192,198)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:188972"
     Region          <251..>337
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          342..>381
                     /region_name="SOAR"
                     /note="STIM1 Orai1-activating region; pfam16533"
                     /db_xref="CDD:465164"
     CDS             1..391
                     /gene="Stim1"
                     /coded_by="BC166914.1:36..>1209"
                     /db_xref="GeneID:361618"
                     /db_xref="RGD:1306831"
ORIGIN      
        1 mdvcarlalw llwglllhqg qslshshsek ntgassgats eesteaefcr idkplchsed
       61 eklsfeavrn ihklmdddan gdvdveesde flredlnyhd ptvkhstfhg edklisvedl
      121 wkawkasevy nwtvdeviqw lityvelpqy eetfrklqlt ghamprlavt nttmtgtvlk
      181 mtdrshrqkl qlkaldtvlf gpplltrhnh lkdfmlvvsi vigvggcwfa yiqnryskeh
      241 mkkmmkdleg lhraeqslhd lqerlhkaqe ehrtvevekv hlekklrdei nlakqeaqrl
      301 kelregtene rsrqkyaeee leqvrealrk aekeleshss wyapealqkw lqlthevevq
      361 yynikkqnae rqllvakega ekkkkkkkkk k
//
Feature
Display: FASTA GenBank Help
Details

Supplemental Content

Change region shown

Customize view

Reference sequence information

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
External link. Please review our privacy policy.