LOCUS NP_595747 93 aa linear PLN 16-AUG-2024
DEFINITION U6 snRNP-associated protein Lsm3 [Schizosaccharomyces pombe].
ACCESSION NP_595747
VERSION NP_595747.1
DBLINK BioProject: PRJNA127
BioSample: SAMEA3138176
DBSOURCE REFSEQ: accession NM_001021647.3
KEYWORDS RefSeq.
SOURCE Schizosaccharomyces pombe (fission yeast)
ORGANISM Schizosaccharomyces pombe
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
Schizosaccharomycetes; Schizosaccharomycetales;
Schizosaccharomycetaceae; Schizosaccharomyces.
REFERENCE 1 (residues 1 to 93)
AUTHORS Schafer,B., Hansen,M. and Lang,B.F.
TITLE Transcription and RNA-processing in fission yeast mitochondria
JOURNAL RNA 11 (5), 785-795 (2005)
PUBMED 15811919
REFERENCE 2 (residues 1 to 93)
AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R.,
Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D.,
Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T.,
Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P.,
Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D.,
Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S.,
Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M.,
Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S.,
Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S.,
Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S.,
Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M.,
Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G.,
Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J.,
Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I.,
Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C.,
Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D.,
Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H.,
Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H.,
Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S.,
Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z.,
Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C.,
Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L.,
Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A.,
Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L.,
Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V.,
Ussery,D., Barrell,B.G. and Nurse,P.
TITLE The genome sequence of Schizosaccharomyces pombe
JOURNAL Nature 415 (6874), 871-880 (2002)
PUBMED 11859360
REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to
Cerutti L]]
REFERENCE 3
AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R.,
Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D.,
Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T.,
Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P.,
Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D.,
Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S.,
Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M.,
Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S.,
Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S.,
Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S.,
Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M.,
Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G.,
Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J.,
Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I.,
Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C.,
Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D.,
Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H.,
Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H.,
Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S.,
Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z.,
Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C.,
Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L.,
Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A.,
Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L.,
Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V.,
Ussery,D., Barrell,B.G. and Nurse,P.
TITLE The genome sequence of Schizosaccharomyces pombe
JOURNAL Nature 415 (6874), 871-880 (2002)
PUBMED 11859360
REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to
Cerutti L]]
REFERENCE 4 (residues 1 to 93)
AUTHORS Trinkl,H., Lang,B.F. and Wolf,K.
TITLE Nucleotide sequence of the gene encoding the small ribosomal RNA in
the mitochondrial genome of the fission yeast Schizosaccharomyces
pombe
JOURNAL Nucleic Acids Res 17 (16), 6730 (1989)
PUBMED 2780299
REFERENCE 5 (residues 1 to 93)
AUTHORS Lang,B.F., Cedergren,R. and Gray,M.W.
TITLE The mitochondrial genome of the fission yeast, Schizosaccharomyces
pombe. Sequence of the large-subunit ribosomal RNA gene, comparison
of potential secondary structure in fungal mitochondrial
large-subunit rRNAs and evolutionary considerations
JOURNAL Eur J Biochem 169 (3), 527-537 (1987)
PUBMED 2446871
REFERENCE 6 (residues 1 to 93)
AUTHORS Lang,B.F., Ahne,F. and Bonen,L.
TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces
pombe. The cytochrome b gene has an intron closely related to the
first two introns in the Saccharomyces cerevisiae cox1 gene
JOURNAL J Mol Biol 184 (3), 353-366 (1985)
PUBMED 4046021
REFERENCE 7 (residues 1 to 93)
AUTHORS Lang,B.F.
TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces
pombe: highly homologous introns are inserted at the same position
of the otherwise less conserved cox1 genes in Schizosaccharomyces
pombe and Aspergillus nidulans
JOURNAL EMBO J 3 (9), 2129-2136 (1984)
PUBMED 6092057
REFERENCE 8 (residues 1 to 93)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (16-AUG-2024) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 9
AUTHORS Wood,V. and Rutherford,K.
CONSRTM PomBase
TITLE Direct Submission
JOURNAL Submitted (13-MAR-2024) University of Cambridge, PomBase, Hopkins
building, Tennis Court Rd, Cambridge, United Kingdom
REFERENCE 10
AUTHORS Wood,V.
CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome
sequencing project, Sanger Institute, The Wellcome Trust Genome
Campus, Hinxton, Cambridge CB10 1SA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to CAB42366.
FEATURES Location/Qualifiers
source 1..93
/organism="Schizosaccharomyces pombe"
/strain="972h-"
/db_xref="taxon:4896"
/chromosome="II"
Protein 1..93
/product="U6 snRNP-associated protein Lsm3"
/calculated_mol_wt=10534
Region 9..90
/region_name="LSm3"
/note="Like-Sm protein 3; cd01730"
/db_xref="CDD:212477"
Site order(14,17..18,23,25..27,30,32,37..40,43..44,46,77..89)
/site_type="other"
/note="putative oligomer interface [polypeptide binding]"
/db_xref="CDD:212477"
Site order(22..28,30..42,44..48)
/site_type="other"
/note="Sm1 motif"
/db_xref="CDD:212477"
Site order(40,42,81)
/site_type="other"
/note="putative RNA binding site [nucleotide binding]"
/db_xref="CDD:212477"
Site 77..88
/site_type="other"
/note="Sm2 motif"
/db_xref="CDD:212477"
CDS 1..93
/gene="lsm3"
/locus_tag="SPOM_SPBC9B6.05C"
/coded_by="NM_001021647.3:56..337"
/db_xref="GeneID:2540212"
/db_xref="PomBase:SPBC9B6.05c"
ORIGIN
1 mesaqavaep ldlvrlslde ivyvklrgdr elngrlhayd ehlnmvlgda eeivtifdde
61 etdkdkalkt irkhyemlfv rgdsviliap prn
//