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NCBI Reference Sequence: XP_054228574.1
Identical Proteins FASTA Graphics
LOCUS XP_054228574 534 aa linear PRI 26-AUG-2024 DEFINITION basic helix-loop-helix ARNT-like protein 2 isoform X6 [Homo sapiens]. ACCESSION XP_054228574 VERSION XP_054228574.1 DBLINK BioProject: PRJNA807723 DBSOURCE REFSEQ: accession XM_054372599.1 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_060936) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_009914755.1-RS_2024_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; RefSeqFE; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/23/2024 ##Genome-Annotation-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..534 /organism="Homo sapiens" /isolate="CHM13" /db_xref="taxon:9606" /chromosome="12" /sex="female" /cell_line="CHM13htert" /tissue_type="hydatidiform mole" /note="haploid cell line" Protein 1..534 /product="basic helix-loop-helix ARNT-like protein 2 isoform X6" /calculated_mol_wt=59800 Region 8..65 /region_name="bHLH-PAS_ARNTL2_PASD9" /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 2 (ARNTL2) and similar proteins; cd11469" /db_xref="CDD:381475" Site order(10..11,14,17..18,22,43..44) /site_type="other" /note="putative DNA binding site [nucleotide binding]" /db_xref="CDD:381475" Site order(21,24,27..28,45,48..49,52,54..56,58) /site_type="other" /note="putative dimer interface [polypeptide binding]" /db_xref="CDD:381475" Region 90..185 /region_name="PAS" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; cd00130" /db_xref="CDD:238075" Site order(105,109,115,128..131,153,158) /site_type="active" /note="putative active site [active]" /db_xref="CDD:238075" Site order(125,129,137,140..141,165,167) /site_type="other" /note="heme pocket [chemical binding]" /db_xref="CDD:238075" Region 268..370 /region_name="PAS_11" /note="PAS domain; pfam14598" /db_xref="CDD:464214" CDS 1..534 /gene="BMAL2" /gene_synonym="ARNTL2; bHLHe6; CLIF; MOP9; PASD9" /coded_by="XM_054372599.1:340..1944" /db_xref="GeneID:56938" /db_xref="HGNC:HGNC:18984" /db_xref="MIM:614517" ORIGIN 1 millvrveah sqtekrrrdk mnnlieelsa mipqcnpmar kldkltvlrm avqhlrslkg 61 ltnsyvgsny rpsflqdnel rhlilktaeg flfvvgcerg kilfvsksvs kilnydqasl 121 tgqslfdflh pkdvakvkeq lssfdispre klidaktglq vhsnlhagrt rvysgsrrsf 181 fcriksckis vkeehgclpn skkkehrkfy tihctgylrs wppnivgmee ernskkdnsn 241 ftclvaigrl qpyivpqnsg einvkptefi trfavngkfv yvdqratail gylpqellgt 301 scyeyfhqdd hnnltdkhka vlqskekilt dsykfrakdg sfvtlksqwf sftnpwtkel 361 eyivsvntlv lghsepgeas flpcssqsse essrqscmsv pgmstgtvlg agsigtdian 421 eildlqrlqs ssylddsspt glmkdthtvn crsmsnkelf ppspsemgel eatrqnqstv 481 avhsheplls dgaqldfdal cdnddtamaa fmnyleaegg lgdpgdfsdi qwtl //
Whole sequence Selected region from: to:
Conserved Domains
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