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transcription factor-like 5 protein isoform X4 [Homo sapiens]

NCBI Reference Sequence: XP_054178831.1

Identical Proteins FASTA Graphics 

LOCUS       XP_054178831             468 aa            linear   PRI 26-AUG-2024
DEFINITION  transcription factor-like 5 protein isoform X4 [Homo sapiens].
ACCESSION   XP_054178831
VERSION     XP_054178831.1
DBLINK      BioProject: PRJNA807723
DBSOURCE    REFSEQ: accession XM_054322856.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_060944) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_009914755.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Homo sapiens"
                     /isolate="CHM13"
                     /db_xref="taxon:9606"
                     /chromosome="20"
                     /sex="female"
                     /cell_line="CHM13htert"
                     /tissue_type="hydatidiform mole"
                     /note="haploid cell line"
     Protein         1..468
                     /product="transcription factor-like 5 protein isoform X4"
                     /calculated_mol_wt=49096
     Region          400..459
                     /region_name="bHLH_TCFL5"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor-like 5 protein (TCFL5) and similar
                     proteins; cd18909"
                     /db_xref="CDD:381479"
     Site            order(401..406,409..410,412..413,435..436)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381479"
     Site            order(413,415..416,419..420,422..423,426,436..438,
                     440..441,443..444,446..448,450..451)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381479"
     CDS             1..468
                     /gene="TCFL5"
                     /gene_synonym="bHLHe82; CHA; E2BP-1; Figlb; SOSF1"
                     /coded_by="XM_054322856.1:153..1559"
                     /db_xref="GeneID:10732"
                     /db_xref="HGNC:HGNC:11646"
                     /db_xref="MIM:604745"
ORIGIN      
        1 msgpgprepp peagaaggea avegagggda algepglsft ttdlslvemt eveytqlqhi
       61 lcshmeaaad geletrlnsa llaaagpgag aggfaaggqg gaapvypvlc psalaadapc
      121 lghidfqelr mmllseagaa ektsgggdga raradgaake gagaaaaaag pdgapearak
      181 pavrvrledr fnsipaeppp aprgpeppep ggalnnlvtl irhpselmnv plqqqnkcta
      241 lvknktaatt talqftyplf ttnacstsgn snlsqtqsss nscsvleaak hqdiglpraf
      301 sfcyqqeies tkqtlgsrnk vlpeqvwikv geaalckqal krnrsrmrql dtnverralg
      361 eiqnvgegat atqgawqsse ssqanlgeqa qsgpqggrsq rrerhnrmer drrrriricc
      421 delnllvpfc naetdkattl qwttaflkyi qerhgdslkk vnillwtg
//
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