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NCBI Reference Sequence: XP_054178831.1
Identical Proteins FASTA Graphics
LOCUS XP_054178831 468 aa linear PRI 26-AUG-2024 DEFINITION transcription factor-like 5 protein isoform X4 [Homo sapiens]. ACCESSION XP_054178831 VERSION XP_054178831.1 DBLINK BioProject: PRJNA807723 DBSOURCE REFSEQ: accession XM_054322856.1 KEYWORDS RefSeq; includes ab initio. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_060944) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_009914755.1-RS_2024_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; RefSeqFE; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/23/2024 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..468 /organism="Homo sapiens" /isolate="CHM13" /db_xref="taxon:9606" /chromosome="20" /sex="female" /cell_line="CHM13htert" /tissue_type="hydatidiform mole" /note="haploid cell line" Protein 1..468 /product="transcription factor-like 5 protein isoform X4" /calculated_mol_wt=49096 Region 400..459 /region_name="bHLH_TCFL5" /note="basic helix-loop-helix (bHLH) domain found in transcription factor-like 5 protein (TCFL5) and similar proteins; cd18909" /db_xref="CDD:381479" Site order(401..406,409..410,412..413,435..436) /site_type="other" /note="putative DNA binding site [nucleotide binding]" /db_xref="CDD:381479" Site order(413,415..416,419..420,422..423,426,436..438, 440..441,443..444,446..448,450..451) /site_type="other" /note="putative dimer interface [polypeptide binding]" /db_xref="CDD:381479" CDS 1..468 /gene="TCFL5" /gene_synonym="bHLHe82; CHA; E2BP-1; Figlb; SOSF1" /coded_by="XM_054322856.1:153..1559" /db_xref="GeneID:10732" /db_xref="HGNC:HGNC:11646" /db_xref="MIM:604745" ORIGIN 1 msgpgprepp peagaaggea avegagggda algepglsft ttdlslvemt eveytqlqhi 61 lcshmeaaad geletrlnsa llaaagpgag aggfaaggqg gaapvypvlc psalaadapc 121 lghidfqelr mmllseagaa ektsgggdga raradgaake gagaaaaaag pdgapearak 181 pavrvrledr fnsipaeppp aprgpeppep ggalnnlvtl irhpselmnv plqqqnkcta 241 lvknktaatt talqftyplf ttnacstsgn snlsqtqsss nscsvleaak hqdiglpraf 301 sfcyqqeies tkqtlgsrnk vlpeqvwikv geaalckqal krnrsrmrql dtnverralg 361 eiqnvgegat atqgawqsse ssqanlgeqa qsgpqggrsq rrerhnrmer drrrriricc 421 delnllvpfc naetdkattl qwttaflkyi qerhgdslkk vnillwtg //
Whole sequence Selected region from: to:
Conserved Domains
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