LOCUS YP_003129562 473 aa linear CON 17-DEC-2014
DEFINITION isopropylmalate isomerase large subunit [Halorhabdus utahensis DSM
12940].
ACCESSION YP_003129562
VERSION YP_003129562.1
DBLINK BioProject: PRJNA59189
DBSOURCE REFSEQ: accession NC_013158.1
KEYWORDS RefSeq.
SOURCE Halorhabdus utahensis DSM 12940
ORGANISM Halorhabdus utahensis DSM 12940
Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
Halobacteriaceae; Halorhabdus.
REFERENCE 1 (residues 1 to 473)
AUTHORS Anderson,I., Tindall,B.J., Pomrenke,H., Goker,M., Lapidus,A.,
Nolan,M., Copeland,A., Glavina Del Rio,T., Chen,F., Tice,H.,
Cheng,J.F., Lucas,S., Chertkov,O., Bruce,D., Brettin,T.,
Detter,J.C., Han,C., Goodwin,L., Land,M., Hauser,L., Chang,Y.J.,
Jeffries,C.D., Pitluck,S., Pati,A., Mavromatis,K., Ivanova,N.,
Ovchinnikova,G., Chen,A., Palaniappan,K., Chain,P., Rohde,M.,
Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C.
and Klenk,H.P.
TITLE Complete genome sequence of Halorhabdus utahensis type strain
(AX-2)
JOURNAL Stand Genomic Sci 1 (3), 218-225 (2009)
PUBMED 21304660
REMARK Publication Status: Online-Only
REFERENCE 2 (residues 1 to 473)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (28-AUG-2009) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 473)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
Mavromatis,K., Mikhailova,N., Ovchinnikova,G., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V.,
Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Tindal,B., Klenk,H.-P.
and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (10-AUG-2009) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence is identical to
ACV10829.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..473
/organism="Halorhabdus utahensis DSM 12940"
/strain="DSM 12940"
/culture_collection="DSM:12940"
/db_xref="taxon:519442"
Protein 1..473
/product="isopropylmalate isomerase large subunit"
/EC_number="4.2.1.33"
/calculated_mol_wt=51613
Region 2..468
/region_name="PRK05478"
/note="3-isopropylmalate dehydratase large subunit"
/db_xref="CDD:235490"
Site order(34,37,129..130,412,431,436)
/site_type="other"
/note="substrate binding site [chemical binding]"
/db_xref="CDD:153133"
Site order(131,348,408,411..412,430)
/site_type="other"
/note="ligand binding site [chemical binding]"
/db_xref="CDD:153133"
CDS 1..473
/locus_tag="Huta_0642"
/coded_by="NC_013158.1:640020..641441"
/inference="protein motif:TFAM:TIGR00170"
/note="dehydratase component, catalyzes the isomerization
between 2-isopropylmalate and 3-isopropylmalate"
/transl_table=11
/db_xref="InterPro:IPR001030"
/db_xref="InterPro:IPR004430"
/db_xref="GeneID:8382910"
CONTIG join(WP_015788409.1:1..473)
ORIGIN
1 msqgtlydkv wdehkvtqlp ngqdqlfvgl hlihevtspq afgmlrerdi evarpdltha
61 tvdhivptsd qsrpysddaa eemmseleen vreagiqfsd pttgdqgivh vigpeqgitq
121 pgktivcgds htsthgafga lafgigtsqi rdvlatqcia mekqkvrkiq vdgelgpgve
181 akdiileiir rlgtdggvgy vyeyageaie nldmegrmsi cnmsieggar agyvnpdett
241 fewmqntdyf qenpeafdel kpywesirsd adaeyddvvh idaselepvv twgttpgqgi
301 gitepiphpe dlpadkqdta rraqehmrve pgetmagydi dvvflgsctn arlpdlrraa
361 divegrevdd svramvvpgs qrvqraaeee glgdifreag fewrnagcsm clgmnedqle
421 gdeasasssn rnfvgrqgsk dgrtvlmnpq mvaaaavtge vtdvrelpev tpa
//