LOCUS AAL49183 139 aa linear INV 20-DEC-2001
DEFINITION RE62842p [Drosophila melanogaster].
ACCESSION AAL49183
VERSION AAL49183.1
DBSOURCE accession AY071561.1
KEYWORDS .
SOURCE Drosophila melanogaster (fruit fly)
ORGANISM Drosophila melanogaster
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
REFERENCE 1 (residues 1 to 139)
AUTHORS Stapleton,M., Brokstein,P., Hong,L., Agbayani,A., Carlson,J.,
Champe,M., Chavez,C., Dorsett,V., Dresnek,D., Farfan,D., Frise,E.,
George,R., Gonzalez,M., Guarin,H., Kronmiller,B., Li,P., Liao,G.,
Miranda,A., Mungall,C.J., Nunoo,J., Pacleb,J., Paragas,V., Park,S.,
Patel,S., Phouanenavong,S., Wan,K., Yu,C., Lewis,S.E., Rubin,G.M.
and Celniker,S.
TITLE Direct Submission
JOURNAL Submitted (18-DEC-2001) Berkeley Drosophila Genome Project,
Lawrence Berkeley National Laboratory, One Cyclotron Road,
Berkeley, CA 94720, USA
COMMENT Sequence submitted by:
Berkeley Drosophila Genome Project
Lawrence Berkeley National Laboratory
Berkeley, CA 94720
This clone was sequenced as part of a high-throughput process to
sequence clones from Drosophila Gene Collection 1 (Rubin et al.,
Science 2000). The sequence has been subjected to integrity checks
for sequence accuracy, presence of a polyA tail and contiguity
within 100 kb in the genome. Thus we believe the sequence to
reflect accurately this particular cDNA clone. However, there are
artifacts associated with the generation of cDNA clones that may
have not been detected in our initial analyses such as internal
priming, priming from contaminating genomic DNA, retained introns
due to reverse transcription of unspliced precursor RNAs, and
reverse transcriptase errors that result in single base changes.
For further information about this sequence, including its location
and relationship to other sequences, please visit our Web site
(http://fruitfly.berkeley.edu) or send email to
cdna@fruitfly.berkeley.edu.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..139
/organism="Drosophila melanogaster"
/strain="y; cn bw sp"
/db_xref="taxon:7227"
Protein 1..139
/product="RE62842p"
Region 3..137
/region_name="TRAPPC2_sedlin"
/note="Trafficking protein particle complex subunit 2;
cd14825"
/db_xref="CDD:341429"
Site order(52..53,75..77,79,102,106,110)
/site_type="other"
/note="TRAPPC5 interface [polypeptide binding]"
/db_xref="CDD:341429"
Site order(107,110..113)
/site_type="other"
/note="TRAPPC3 interface [polypeptide binding]"
/db_xref="CDD:341429"
CDS 1..139
/coded_by="AY071561.1:22..441"
/note="Longest ORF"
ORIGIN
1 mstyyfvivg qndnpiyeke fstvnkelrk edhrhltqfi ahaaldlvde hkwktanmql
61 ksidrfnqwf vsafitasqi rfiivhdnkn degiknffne mydtyiknsm nafyrintpi
121 kspmfekkse ifgrkylls
//