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predicted protein [Scheffersomyces stipitis CBS 6054]

GenBank: ABN65271.2

Identical Proteins FASTA Graphics 

LOCUS       ABN65271                 265 aa            linear   PLN 14-MAY-2014
DEFINITION  predicted protein [Scheffersomyces stipitis CBS 6054].
ACCESSION   ABN65271
VERSION     ABN65271.2
DBLINK      BioProject: PRJNA16843
            BioSample: SAMN02746101
DBSOURCE    accession CP000497.1
KEYWORDS    .
SOURCE      Scheffersomyces stipitis CBS 6054 (Pichia stipitis CBS 6054)
  ORGANISM  Scheffersomyces stipitis CBS 6054
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Pichiomycetes; Debaryomycetaceae; Scheffersomyces.
REFERENCE   1  (residues 1 to 265)
  AUTHORS   Jeffries,T.W., Grigoriev,I.V., Grimwood,J., Laplaza,J.M., Aerts,A.,
            Salamov,A., Schmutz,J., Lindquist,E., Dehal,P., Shapiro,H.,
            Jin,Y.S., Passoth,V. and Richardson,P.M.
  TITLE     Genome sequence of the lignocellulose-bioconverting and
            xylose-fermenting yeast Pichia stipitis
  JOURNAL   Nat. Biotechnol. 25 (3), 319-326 (2007)
   PUBMED   17334359
REFERENCE   2  (residues 1 to 265)
  AUTHORS   Grigoriev,I., Grimwood,J., Aerts,A., Salamov,A., Zhou,K., Lou,Y.,
            Pitluck,S., Schmutz,J., Myers,R.M., Lucas,S., Detter,J.C., Glavina
            del Rio,T., Jin,Y.-S., Passoth,V., Laplaza,J.M., Jeffries,T.W. and
            Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (12-DEC-2006) US DOE Joint Genome Institute, 2800
            Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT     On Jun 22, 2007 this sequence version replaced ABN65271.1.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Scheffersomyces stipitis CBS 6054"
                     /strain="CBS 6054"
                     /db_xref="taxon:322104"
                     /chromosome="3"
     Protein         1..265
                     /product="predicted protein"
     Region          178..245
                     /region_name="SNARE_SYN8"
                     /note="SNARE motif of SYN8; cd15859"
                     /db_xref="CDD:277212"
     Site            order(182..185,187..189,191..193,195..196,198..203,
                     205..206,208..209,212..213,215..217,219..221,223..224,
                     226..227,230..231,233..234,236)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277212"
     Site            209
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277212"
     CDS             1..265
                     /locus_tag="PICST_57730"
                     /coded_by="join(CP000497.1:110272..110640,
                     CP000497.1:110680..110738,CP000497.1:110754..111123)"
                     /transl_table=12
                     /db_xref="JGIDB:Picst3_57730"
ORIGIN      
        1 mapsisevra sqskinvyld elnsnleerd rlvevlrltp sandnyelis llqklvkyfk
       61 ylqqdlisli kvgenveqyi nqfreavaky edvheklagd ssisvseyhf tpaefpqrkt
      121 pissvrfqed ildkdaddhf rnenfkpysd eessnntdse sfdaqtnqhl faqhqqtile
      181 qdqsldvlhq siirqhtmgq sinselddhl illndlengv ddanyrlnta anrlhefrkr
      241 vrengslvti ivltviliml lvvln
//
Feature
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Reference sequence information

  • RefSeq protein
    See the reference protein sequence for predicted protein (XP_001383300.2).

More about the gene PICST_57730

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