LOCUS ABN65271 265 aa linear PLN 14-MAY-2014
DEFINITION predicted protein [Scheffersomyces stipitis CBS 6054].
ACCESSION ABN65271
VERSION ABN65271.2
DBLINK BioProject: PRJNA16843
BioSample: SAMN02746101
DBSOURCE accession CP000497.1
KEYWORDS .
SOURCE Scheffersomyces stipitis CBS 6054 (Pichia stipitis CBS 6054)
ORGANISM Scheffersomyces stipitis CBS 6054
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
Pichiomycetes; Debaryomycetaceae; Scheffersomyces.
REFERENCE 1 (residues 1 to 265)
AUTHORS Jeffries,T.W., Grigoriev,I.V., Grimwood,J., Laplaza,J.M., Aerts,A.,
Salamov,A., Schmutz,J., Lindquist,E., Dehal,P., Shapiro,H.,
Jin,Y.S., Passoth,V. and Richardson,P.M.
TITLE Genome sequence of the lignocellulose-bioconverting and
xylose-fermenting yeast Pichia stipitis
JOURNAL Nat. Biotechnol. 25 (3), 319-326 (2007)
PUBMED 17334359
REFERENCE 2 (residues 1 to 265)
AUTHORS Grigoriev,I., Grimwood,J., Aerts,A., Salamov,A., Zhou,K., Lou,Y.,
Pitluck,S., Schmutz,J., Myers,R.M., Lucas,S., Detter,J.C., Glavina
del Rio,T., Jin,Y.-S., Passoth,V., Laplaza,J.M., Jeffries,T.W. and
Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (12-DEC-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT On Jun 22, 2007 this sequence version replaced ABN65271.1.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..265
/organism="Scheffersomyces stipitis CBS 6054"
/strain="CBS 6054"
/db_xref="taxon:322104"
/chromosome="3"
Protein 1..265
/product="predicted protein"
Region 178..245
/region_name="SNARE_SYN8"
/note="SNARE motif of SYN8; cd15859"
/db_xref="CDD:277212"
Site order(182..185,187..189,191..193,195..196,198..203,
205..206,208..209,212..213,215..217,219..221,223..224,
226..227,230..231,233..234,236)
/site_type="other"
/note="heterotetramer interface [polypeptide binding]"
/db_xref="CDD:277212"
Site 209
/site_type="other"
/note="zero layer"
/db_xref="CDD:277212"
CDS 1..265
/locus_tag="PICST_57730"
/coded_by="join(CP000497.1:110272..110640,
CP000497.1:110680..110738,CP000497.1:110754..111123)"
/transl_table=12
/db_xref="JGIDB:Picst3_57730"
ORIGIN
1 mapsisevra sqskinvyld elnsnleerd rlvevlrltp sandnyelis llqklvkyfk
61 ylqqdlisli kvgenveqyi nqfreavaky edvheklagd ssisvseyhf tpaefpqrkt
121 pissvrfqed ildkdaddhf rnenfkpysd eessnntdse sfdaqtnqhl faqhqqtile
181 qdqsldvlhq siirqhtmgq sinselddhl illndlengv ddanyrlnta anrlhefrkr
241 vrengslvti ivltviliml lvvln
//