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hypothetical protein QQ24_08550 [Escherichia coli str. K-12 substr. MG1655]

GenBank: ALI39519.1

Identical Proteins FASTA Graphics 

LOCUS       ALI39519                 191 aa            linear   BCT 16-DEC-2015
DEFINITION  hypothetical protein QQ24_08550 [Escherichia coli str. K-12 substr.
            MG1655].
ACCESSION   ALI39519
VERSION     ALI39519.1
DBLINK      BioProject: PRJNA268139
            BioSample: SAMN03203487
DBSOURCE    accession CP012868.1
KEYWORDS    .
SOURCE      Escherichia coli str. K-12 substr. MG1655
  ORGANISM  Escherichia coli str. K-12 substr. MG1655
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 191)
  AUTHORS   Mohan,A., Bhosle,A. and Chandra,N.
  TITLE     Complete Genome Sequences of an Escherichia coli Laboratory Strain
            and Trimethoprim-Resistant (TMP32XR) Mutant Strains
  JOURNAL   Genome Announc 3 (6), e01434-15 (2015)
   PUBMED   26659679
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 191)
  AUTHORS   Mohan,A., Bhosle,A. and Chandra,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-OCT-2015) Department of Biochemistry, Indian
            Institute of Science, Biological Sciences Building,C.V.Raman Road,
            Bangalore, Karnataka 560012, India
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Source DNA is avaliable from Prof. Nagasuma Chandra.
            
            ##Genome-Assembly-Data-START##
            Assembly Method           :: bowtie v. 2-2.2.3
            Reference-guided Assembly :: U00096.3
            Genome Coverage           :: 100x
            Sequencing Technology     :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 10/05/2015 13:32:28
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 4,580
            CDS                          :: 4,398
            Pseudo Genes                 :: 73
            CRISPR Arrays                :: 2
            rRNAs                        :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs               :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                        :: 87
            ncRNA                        :: 0
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Escherichia coli str. K-12 substr. MG1655"
                     /strain="K-12"
                     /sub_strain="MG1655"
                     /db_xref="taxon:511145"
                     /geo_loc_name="India"
     Protein         1..191
                     /product="hypothetical protein"
     Region          12..184
                     /region_name="G3P_antiterm"
                     /note="Glycerol-3-phosphate responsive antiterminator;
                     pfam04309"
                     /db_xref="CDD:427855"
     CDS             1..191
                     /locus_tag="QQ24_08550"
                     /coded_by="complement(CP012868.1:1746885..1747460)"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_001116197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
ORIGIN      
        1 mpllhllrqn pviaavkdna slqlaidsec qfisvlygni ctisnivkki knagkyafih
       61 vdllegasnk evviqflklv teadgiistk asmlkaarae gffcihrlfi vdsisfhnid
      121 kqvaqsnpdc ieilpgcmpk vlgwvtekir qpliagglvc deedarnain agvvalsttn
      181 tgvwtlakkl l
//
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Reference sequence information

  • RefSeq protein
    See the reference protein sequence for putative anti-terminator regulatory protein (NP_417248.1).

More about the ygcP gene

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