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GenBank: ALI39519.1
Identical Proteins FASTA Graphics
LOCUS ALI39519 191 aa linear BCT 16-DEC-2015 DEFINITION hypothetical protein QQ24_08550 [Escherichia coli str. K-12 substr. MG1655]. ACCESSION ALI39519 VERSION ALI39519.1 DBLINK BioProject: PRJNA268139 BioSample: SAMN03203487 DBSOURCE accession CP012868.1 KEYWORDS . SOURCE Escherichia coli str. K-12 substr. MG1655 ORGANISM Escherichia coli str. K-12 substr. MG1655 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (residues 1 to 191) AUTHORS Mohan,A., Bhosle,A. and Chandra,N. TITLE Complete Genome Sequences of an Escherichia coli Laboratory Strain and Trimethoprim-Resistant (TMP32XR) Mutant Strains JOURNAL Genome Announc 3 (6), e01434-15 (2015) PUBMED 26659679 REMARK Publication Status: Online-Only REFERENCE 2 (residues 1 to 191) AUTHORS Mohan,A., Bhosle,A. and Chandra,N. TITLE Direct Submission JOURNAL Submitted (05-OCT-2015) Department of Biochemistry, Indian Institute of Science, Biological Sciences Building,C.V.Raman Road, Bangalore, Karnataka 560012, India COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is avaliable from Prof. Nagasuma Chandra. ##Genome-Assembly-Data-START## Assembly Method :: bowtie v. 2-2.2.3 Reference-guided Assembly :: U00096.3 Genome Coverage :: 100x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 10/05/2015 13:32:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 4,580 CDS :: 4,398 Pseudo Genes :: 73 CRISPR Arrays :: 2 rRNAs :: 8, 7, 7 (5S, 16S, 23S) complete rRNAs :: 8, 7, 7 (5S, 16S, 23S) tRNAs :: 87 ncRNA :: 0 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..191 /organism="Escherichia coli str. K-12 substr. MG1655" /strain="K-12" /sub_strain="MG1655" /db_xref="taxon:511145" /geo_loc_name="India" Protein 1..191 /product="hypothetical protein" Region 12..184 /region_name="G3P_antiterm" /note="Glycerol-3-phosphate responsive antiterminator; pfam04309" /db_xref="CDD:427855" CDS 1..191 /locus_tag="QQ24_08550" /coded_by="complement(CP012868.1:1746885..1747460)" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_001116197.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 ORIGIN 1 mpllhllrqn pviaavkdna slqlaidsec qfisvlygni ctisnivkki knagkyafih 61 vdllegasnk evviqflklv teadgiistk asmlkaarae gffcihrlfi vdsisfhnid 121 kqvaqsnpdc ieilpgcmpk vlgwvtekir qpliagglvc deedarnain agvvalsttn 181 tgvwtlakkl l //
Whole sequence Selected region from: to:
Conserved Domains
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