U.S. flag

An official website of the United States government

AT5G43930 [Arabidopsis thaliana]

GenBank: BAH19663.1

Identical Proteins FASTA Graphics 

LOCUS       BAH19663                 726 aa            linear   PLN 21-APR-2009
DEFINITION  AT5G43930 [Arabidopsis thaliana].
ACCESSION   BAH19663
VERSION     BAH19663.1
DBSOURCE    accession AK316965.1
KEYWORDS    .
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1
  AUTHORS   Iida,K., Fukami-Kobayashi,K., Toyoda,A., Sakaki,Y., Kobayashi,M.,
            Seki,M. and Shinozaki,K.
  TITLE     Analysis of multiple occurrences of alternative splicing events in
            Arabidopsis thaliana using novel sequenced full-length cDNAs
  JOURNAL   DNA Res. 16 (3), 155-164 (2009)
   PUBMED   19423640
REFERENCE   2  (residues 1 to 726)
  AUTHORS   Fukami-Kobayashi,K., Iida,K., Kobayashi,M., Seki,M., Ishida,J.,
            Nakajima,M., Kawashima,M., Morosawa,T., Toyoda,A., Sakaki,Y.,
            Carninci,P., Kawai,J., Hayashizaki,Y. and Shinozaki,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2008) Contact:Kaoru Fukami-Kobayashi RIKEN,
            BioResource Center; 3-1-1 Koyadai, Tsukuba, Ibaraki 305-0074, Japan
            URL :http://www.brc.riken.jp/
COMMENT     An Arabidopsis full-length cDNA library was constructed essentially
            as reported previously. (Seki et al. (1998) Plant J. 15:707-720;
            Seki et al. (2002) Science 296:141-145)
            This clone is in a modified pBluescript vector.
            Please visit our web site (http://rarge.gsc.riken.jp/) for further
            details.
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="5"
                     /clone="RAFL16-52-K09"
                     /clone_lib="RAFL16"
                     /ecotype="Columbia"
                     /note="dark-grown"
     Protein         1..726
                     /name="AT5G43930"
     Region          <111..>253
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          111..145
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          153..188
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          193..231
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..726
                     /gene="AT5G43930"
                     /coded_by="AK316965.1:270..2450"
                     /note="TAIR description: nucleotide binding;
                     alternative splicing: AT5G43930.2"
ORIGIN      
        1 mtqsicsssq dqsssprsli tprksatkfh rrrgrsvfnm lvqremspka kfvprkrwgk
       61 srwytdsscg tnnesmketg qsltswveae slqhlsakyc plgapprsti aaafstdgrt
      121 lasthgdhtv kiidcetgnc lkvltghrrt pwvvrfhphh seivasgsld levrlwnttt
      181 secirshlfy rpiasiafha egellavasg hklhmwhynr rgegssptvv lktrrslrav
      241 hfhphgapll ltaevneids ldssmsrats mgylrypppa ilftstesnq tslaaenenr
      301 tsspplplat ssgpsgpnsv pgnspsnifl tragdrtspa vdgmdvdeaq pvgrngipsq
      361 vsnrsdfpel gqirqlfhfr drvswelpfl qgwlmaqghg vanpvvtptg ssnhgisaps
      421 stasleaava lleipsgvnl havsrrggaq eqtsqpqfsr tglpegvssr ntqhgsdaqp
      481 vvnrvqsela tsiaasaaaa aaaelpctvk lrmwshdikd pyaqlksdrc lftiphavlc
      541 semgahyspc grylaacvac vfphgeidpg lqtqaqqdsg latsptrhpv tahqviyelr
      601 vyslqkesfg svlvsraira ahcltsiqfs ptsehillay grrhgsllrs ivsdgettsh
      661 fftvleiyrv sdmelvrvlp ssedevnvac fhpspggglv ygtkegklri fqyntaatsn
      721 ftgpnt
//
Feature
Display: FASTA GenBank Help
Details

Supplemental Content

Change region shown

Customize view

Reference sequence information

More about the AT5G43930 gene

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
External link. Please review our privacy policy.