LOCUS EQX23872 968 aa linear BCT 28-AUG-2013
DEFINITION RNA polymerase-associated protein rapA [Escherichia coli UMEA
3161-1].
ACCESSION EQX23872
VERSION EQX23872.1
DBLINK BioProject: PRJNA186301
BioSample: SAMN01885911
DBSOURCE accession AWBT01000001.1
KEYWORDS .
SOURCE Escherichia coli UMEA 3161-1
ORGANISM Escherichia coli UMEA 3161-1
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE 1 (residues 1 to 968)
AUTHORS Feldgarden,M., Frimodt-Moller,N., Leihof,R.F., Rasmussen,L.,
Young,S.K., Zeng,Q., Gargeya,S., Abouelleil,A., Alvarado,L.,
Berlin,A.M., Chapman,S.B., Gainer-Dewar,J., Goldberg,J., Gnerre,S.,
Griggs,A., Gujja,S., Hansen,M., Howarth,C., Imamovic,A.,
Larimer,J., McCowan,C., Murphy,C., Pearson,M., Poon,T., Priest,M.,
Roberts,A., Saif,S., Shea,T., Sykes,S., Wortman,J., Nusbaum,C. and
Birren,B.
CONSRTM The Broad Institute Genome Sequencing Platform, The Broad Institute
Genome Sequencing Center for Infectious Disease
TITLE The Genome Sequence of Escherichia coli UMEA 3161-1
JOURNAL Unpublished
REFERENCE 2 (residues 1 to 968)
AUTHORS Feldgarden,M., Frimodt-Moller,N., Leihof,R.F., Rasmussen,L.,
Young,S.K., Zeng,Q., Gargeya,S., Abouelleil,A., Alvarado,L.,
Berlin,A.M., Chapman,S.B., Gainer-Dewar,J., Goldberg,J., Gnerre,S.,
Griggs,A., Gujja,S., Hansen,M., Howarth,C., Imamovic,A.,
Larimer,J., McCowan,C., Murphy,C., Pearson,M., Poon,T., Priest,M.,
Roberts,A., Saif,S., Shea,T., Sykes,S., Wortman,J., Nusbaum,C. and
Birren,B.
CONSRTM The Broad Institute Genome Sequencing Platform, The Broad Institute
Genome Sequencing Center for Infectious Disease
TITLE Direct Submission
JOURNAL Submitted (24-JUL-2013) Broad Institute of MIT and Harvard, 7
Cambridge Center, Cambridge, MA 02142, USA
COMMENT Please be aware that the annotation is done automatically with
little or no manual curation.
##Genome-Assembly-Data-START##
Assembly Method :: allpaths v. R46484
Assembly Name :: Esch_coli_UMEA_3161-1_V1
Genome Coverage :: 137.0x
Sequencing Technology :: Illumina
##Genome-Assembly-Data-END##
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..968
/organism="Escherichia coli UMEA 3161-1"
/strain="UMEA 3161-1"
/db_xref="taxon:1281199"
Protein 1..968
/product="RNA polymerase-associated protein rapA"
Region 2..966
/region_name="PRK04914"
/note="RNA polymerase-associated protein RapA"
/db_xref="CDD:235319"
CDS 1..968
/locus_tag="G924_00059"
/coded_by="complement(AWBT01000001.1:61449..64355)"
/transl_table=11
ORIGIN
1 mpftlgqrwi sdteselglg tvvavdartv tllfpstgen rlyarsdspv trvmfnpgdt
61 itshdgwqmq veevkeengl ltyigtrldt eesgvalrev fldsklvfsk pqdrlfagqi
121 drmdrfalry rarkysseqf rmpysglrgq rtsliphqln iahdvgrrha prvlladevg
181 lgktieagmi lhqqllsgaa ervliivpet lqhqwlveml rrfnlrfalf dderyaeaqh
241 daynpfdteq lvicsldfar rskqrlehlc eaewdllvvd eahhlvwsed apsreyqaie
301 qlaehvpgvl lltatpeqlg meshfarlrl ldpnrfhdfa qfveeqknyr pvadavamll
361 agnklsndel nmlgemigeq diepllqaan sdsedaqsar qelvsmlmdr hgtsrvlfrn
421 trngvkgfpk relhtiklpl ptqyqtaikv sgimgarksa edrardmlyp eriyqefegd
481 natwwnfdpr vewlmgylts hrsqkvlvic akaatalqle qvlreregir aavfhegmsi
541 ierdraaawf aeedtgaqvl lcseigsegr nfqfashmvm fdlpfnpdll eqrigrldri
601 gqahdiqihv pylektaqsv lvrwyhegld afehtcptgr tiydsvyndl inylaspdet
661 egfddliknc reqhealkaq leqgrdrlle ihsnggekaq alaesieeqd ddtnliafam
721 nlfdiiginq ddrgdnmivl tpsdhmlvpd fpglsedgit itfdrevala redaqfitwe
781 hplirngldl ilsgdtgsst isllknkalp vgtllveliy vveaqapkql qlnrflpptp
841 vrmlldkngn nlaaqvefet fnrqlnavnr htgsklvnav qqdvhailql geaqieksar
901 alidaarnea deklsaelsr lealravnpn irddeltaie snrqqvmesl dqagwrldal
961 rlivvthq
//