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putative protein family UPF0310 [Pseudomonas sp. GM30]

GenBank: EUB86023.1

Identical Proteins FASTA Graphics 

LOCUS       EUB86023                 149 aa            linear   BCT 28-JAN-2014
DEFINITION  putative protein family UPF0310 [Pseudomonas sp. GM30].
ACCESSION   EUB86023
VERSION     EUB86023.1
DBLINK      BioProject: PRJNA83079
            BioSample: SAMN00839637
DBSOURCE    accession AKJP02000012.1
KEYWORDS    .
SOURCE      Pseudomonas sp. GM30
  ORGANISM  Pseudomonas sp. GM30
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 149)
  AUTHORS   Brown,S.D., Utturkar,S.M., Klingeman,D.M., Johnson,C.M.,
            Martin,S.L., Land,M.L., Lu,T.Y., Schadt,C.W., Doktycz,M.J. and
            Pelletier,D.A.
  TITLE     Twenty-one genome sequences from Pseudomonas species and 19 genome
            sequences from diverse bacteria isolated from the rhizosphere and
            endosphere of Populus deltoides
  JOURNAL   J. Bacteriol. 194 (21), 5991-5993 (2012)
   PUBMED   23045501
REFERENCE   2  (residues 1 to 149)
  AUTHORS   Brown,S.D., Utturkar,S.M., Klingeman,D.M., Johnson,C.M.,
            Martin,S.L., Land,M.L., Lu,T.-Y., Schadt,C.W., Pelletier,D.A. and
            Doktycz,M.J.
  TITLE     Sequencing of Twenty One Pseudomonas Genomes and Twenty Two Genomes
            from Diverse Bacteria Isolated from Populus deltoides Endosphere
            Communities
  JOURNAL   Unpublished
REFERENCE   3  (residues 1 to 149)
  AUTHORS   Brown,S.D., Utturkar,S.M., Klingeman,D.M., Johnson,C.M.,
            Martin,S.L., Land,M.L., Lu,T.-Y.S., Schadt,C.W., Pelletier,D.A. and
            Doktycz,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-MAY-2012) Bioscience Division, Oak Ridge National
            Laboratory, Bethel Valley Road, Oak Ridge, TN 37831, USA
REFERENCE   4  (residues 1 to 149)
  AUTHORS   Brown,S.D., Utturkar,S.M., Klingeman,D.M., Johnson,C.M.,
            Martin,S.L., Land,M.L., Lu,T.-Y., Schadt,C.W., Pelletier,D.A. and
            Doktycz,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JUL-2013) Bioscience Division, Oak Ridge National
            Laboratory, Bethel Valley Road, Oak Ridge, TN 37831, USA
COMMENT     Source DNA available from Dale Pelletier at Bioscience Division,
            Oak Ridge National Laboratory, Oak Ridge, TN, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.8
            Assembly Name         :: Pseudomonas.strGM30_v2.0
            Genome Coverage       :: 582x
            Sequencing Technology :: Illumina HiSeq2000; Roche 454
            ##Genome-Assembly-Data-END##
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Pseudomonas sp. GM30"
                     /strain="GM30"
                     /isolation_source="root"
                     /host="Populus deltoides"
                     /db_xref="taxon:1144328"
                     /geo_loc_name="USA: Tennessee"
                     /collection_date="01-Oct-2009"
     Protein         1..149
                     /product="putative protein family UPF0310"
     Region          2..148
                     /region_name="EVE"
                     /note="EVE domains are putative RNA-binding domains that
                     belong to the PUA superfamily; cd21133"
                     /db_xref="CDD:410978"
     CDS             1..149
                     /locus_tag="PMI25_004872"
                     /coded_by="complement(AKJP02000012.1:39034..39483)"
                     /inference="protein motif:PFAM:PF01878"
                     /note="PFAM: Uncharacterized protein family UPF0310;
                     KEGG: hypothetical protein"
                     /transl_table=11
                     /db_xref="InterPro:IPR002740"
ORIGIN      
        1 maywlmksep delsikglek lgtarwdgvr nyqarnflra mavgdefffy hsscpepgia
       61 gigriiqaay pdptalepes hyfdpkatpe knawsaidva hvetfarvlk ldylkqqtal
      121 aemplvqkgs rlsvmpvtae qwaavlglr
//
Feature
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