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Rox3p [Saccharomyces cerevisiae S288C]

NCBI Reference Sequence: NP_009459.1

Identical Proteins FASTA Graphics 

LOCUS       NP_009459                220 aa            linear   PLN 17-DEC-2024
DEFINITION  Rox3p [Saccharomyces cerevisiae S288C].
ACCESSION   NP_009459
VERSION     NP_009459.1
DBLINK      BioProject: PRJNA128
DBSOURCE    REFSEQ: accession NM_001178333.1
KEYWORDS    RefSeq.
SOURCE      Saccharomyces cerevisiae S288C
  ORGANISM  Saccharomyces cerevisiae S288C
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Saccharomycetes; Saccharomycetales; Saccharomycetaceae;
            Saccharomyces.
REFERENCE   1  (residues 1 to 220)
  AUTHORS   Engel,S.R., Wong,E.D., Nash,R.S., Aleksander,S., Alexander,M.,
            Douglass,E., Karra,K., Miyasato,S.R., Simison,M., Skrzypek,M.S.,
            Weng,S. and Cherry,J.M.
  TITLE     New data and collaborations at the Saccharomyces Genome Database:
            updated reference genome, alleles, and the Alliance of Genome
            Resources
  JOURNAL   Genetics 220 (4) (2022)
   PUBMED   34897464
REFERENCE   2  (residues 1 to 220)
  AUTHORS   Goffeau,A., Barrell,B.G., Bussey,H., Davis,R.W., Dujon,B.,
            Feldmann,H., Galibert,F., Hoheisel,J.D., Jacq,C., Johnston,M.,
            Louis,E.J., Mewes,H.W., Murakami,Y., Philippsen,P., Tettelin,H. and
            Oliver,S.G.
  TITLE     Life with 6000 genes
  JOURNAL   Science 274 (5287), 546 (1996)
   PUBMED   8849441
REFERENCE   3  (residues 1 to 220)
  AUTHORS   Feldmann,H., Aigle,M., Aljinovic,G., Andre,B., Baclet,M.C.,
            Barthe,C., Baur,A., Becam,A.M., Biteau,N., Boles,E. et al.
  TITLE     Complete DNA sequence of yeast chromosome II
  JOURNAL   EMBO J. 13 (24), 5795-5809 (1994)
   PUBMED   7813418
REFERENCE   4  (residues 1 to 220)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (17-DEC-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   5  (residues 1 to 220)
  CONSRTM   Saccharomyces Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (04-MAY-2012) Department of Genetics, Stanford
            University, Stanford, CA 94305-5120, USA
  REMARK    Protein update by submitter
REFERENCE   6  (residues 1 to 220)
  CONSRTM   Saccharomyces Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2011) Department of Genetics, Stanford
            University, Stanford, CA 94305-5120, USA
  REMARK    Sequence update by submitter
REFERENCE   7  (residues 1 to 220)
  CONSRTM   Saccharomyces Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (11-DEC-2009) Department of Genetics, Stanford
            University, Stanford, CA 94305-5120, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by SGD. The reference
            sequence is identical to DAA07030.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider :: SGD
            Annotation Status   :: Full Annotation
            Annotation Version  :: R64-4-1
            URL                 :: http://www.yeastgenome.org/
            ##Genome-Annotation-Data-END##
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Saccharomyces cerevisiae S288C"
                     /strain="S288C"
                     /db_xref="taxon:559292"
                     /chromosome="II"
     Protein         1..220
                     /product="Rox3p"
                     /calculated_mol_wt=24726
     Region          26..219
                     /region_name="Rox3"
                     /note="Rox3 mediator complex subunit; pfam08633"
                     /db_xref="CDD:430118"
     CDS             1..220
                     /gene="ROX3"
                     /locus_tag="YBL093C"
                     /gene_synonym="MED19; NUT3; RMR1; SSN7; SSX2"
                     /coded_by="NM_001178333.1:1..663"
                     /experiment="EXISTENCE:direct assay:GO:0005634 nucleus
                     [PMID:1656237]"
                     /experiment="EXISTENCE:direct assay:GO:0070847 core
                     mediator complex [PMID:9891034]"
                     /experiment="EXISTENCE:mutant phenotype:GO:0000122
                     negative regulation of transcription by RNA polymerase II
                     [PMID:16452140]"
                     /experiment="EXISTENCE:mutant phenotype:GO:0001113
                     transcription open complex formation at RNA polymerase II
                     promoter [PMID:20048049]"
                     /experiment="EXISTENCE:mutant phenotype:GO:0003713
                     transcription coactivator activity [PMID:15831453]"
                     /experiment="EXISTENCE:mutant phenotype:GO:0045944
                     positive regulation of transcription by RNA polymerase II
                     [PMID:16452140]"
                     /experiment="EXISTENCE:mutant phenotype:GO:0051123 RNA
                     polymerase II preinitiation complex assembly
                     [PMID:15964818]"
                     /note="Subunit of the RNA polymerase II mediator complex;
                     associates with core polymerase subunits to form the RNA
                     polymerase II holoenzyme"
                     /db_xref="GeneID:852184"
                     /db_xref="SGD:S000000189"
ORIGIN      
        1 masrvdettv psyyyyvdpe ttytyqqpnp lqdlisvygl ddisrqvart nldgtkavkl
       61 rksyknqiad lsgkfstipt rengkggqia hilfqnnpdm miqppqqgqn mseqqwreql
      121 rnrdialfqp pnfdwdlcss vlsqfersyp sefanqnqgg aqapfdiddl afdldgtgks
      181 qsgsnsgnns kkrknkssgs smatpthsds hedmkrrrle
//
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Protein 3D Structure

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Reference sequence information

  • RefSeq mRNA
    See reference mRNA sequence for the ROX3 gene (NM_001178333.1).

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