LOCUS NP_190730 755 aa linear PLN 20-OCT-2022
DEFINITION PAP/OAS1 substrate-binding domain superfamily [Arabidopsis
thaliana].
ACCESSION NP_190730
VERSION NP_190730.2
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
DBSOURCE REFSEQ: accession NM_115021.2
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 755)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (residues 1 to 755)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 755)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (residues 1 to 755)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
The reference sequence is identical to AEE78813.
On May 13, 2003 this sequence version replaced NP_190730.1.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..755
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
Protein 1..755
/product="PAP/OAS1 substrate-binding domain superfamily"
/calculated_mol_wt=84610
Region 57..163
/region_name="NT_PAP_TUTase"
/note="Nucleotidyltransferase (NT) domain of poly(A)
polymerases and terminal uridylyl transferases; cd05402"
/db_xref="CDD:143392"
Site order(80..82,92..93,95,138..139,141,143,152,159..160,163)
/site_type="active"
/db_xref="CDD:143392"
Site order(80,138,141,143,152,159..160)
/site_type="active"
/note="putative primer-binding pocket [active]"
/db_xref="CDD:143392"
Site order(93,95,152)
/site_type="metal-binding"
/note="metal binding triad [ion binding]"
/db_xref="CDD:143392"
CDS 1..755
/locus_tag="AT3G51620"
/gene_synonym="T18N14.7"
/coded_by="NM_115021.2:208..2475"
/inference="Similar to RNA sequence,
EST:INSD:ES170677.1,INSD:EL163096.1,INSD:ES080045.1,
INSD:AV565036.1,INSD:ES091104.1,INSD:AV530675.1,
INSD:EL274499.1,INSD:EG482820.1,INSD:EL056415.1,
INSD:ES108155.1,INSD:EL215917.1,INSD:AV529596.1,
INSD:EL037237.1,INSD:ES192405.1,INSD:AV566519.1,
INSD:AV440370.1,INSD:CB255520.1"
/note="PAP/OAS1 substrate-binding domain superfamily; BEST
Arabidopsis thaliana protein match is:
nucleotidyltransferases (TAIR:AT3G61690.1); Has 270 Blast
hits to 218 proteins in 57 species: Archae - 0; Bacteria -
2; Metazoa - 18; Fungi - 29; Plants - 185; Viruses - 0;
Other Eukaryotes - 36 (source: NCBI BLink)."
/db_xref="GeneID:824325"
/db_xref="TAIR:AT3G51620"
/db_xref="Araport:AT3G51620"
ORIGIN
1 maadlddlee esssslsppl lppprsplnq pelwmrveea treiieqvhp tlvsedrrrd
61 vilyvqklir mtlgcevhsf gsvplktylp dgdidltafg glyheeelaa kvfavleree
121 hnlssqfvvk dvqliraevk lvkclvqniv vdisfnqigg ictlcflekv lykfldyfsk
181 fdwdsycisl ngpvclsslp divvetpeng gedllltsef lkeclemysv psrgfetnpr
241 gfqskhlniv dplketnnlg rsvskgnfyr irsaftygar klgqlflqsd eaisselrkf
301 fsnmllrhgs gqrpdvhdai pflrynryna ilpasnhfqe gqvvnesess sssgatgngr
361 hdqedsldag vsipsttgpd lsgspgetvp svseerfsgd akdlatlriq kleisddamk
421 spclsdkesd splngkhhsf nqmrngevln gngvgkqqen swhtgsrrvk dihinenene
481 hvgyedlpfa savpwpqedm hlhysghcvs gtpnmlsdls gdyesqlnsl rfgrwwfdyv
541 qngpmsplsp pglpqlpnnn swevmrhalp frrnaptpvn angvvprqvf fhvnpqmipg
601 pgfgieelpk prgtgtyfpn anhyrdrpfs prgrnshqar sprnngrsms qahsemnfpd
661 rntrerqlhy pnqtngscdm shtdsldsfp dtngstnhpy ekapdfrpte plpvevlspp
721 edskprdsie ghhnrphrpk prpsstqeer dvhvg
//