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PAP/OAS1 substrate-binding domain superfamily [Arabidopsis thaliana]

NCBI Reference Sequence: NP_190730.2

Identical Proteins FASTA Graphics 

LOCUS       NP_190730                755 aa            linear   PLN 20-OCT-2022
DEFINITION  PAP/OAS1 substrate-binding domain superfamily [Arabidopsis
            thaliana].
ACCESSION   NP_190730
VERSION     NP_190730.2
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
DBSOURCE    REFSEQ: accession NM_115021.2
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 755)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (residues 1 to 755)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 755)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (residues 1 to 755)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            The reference sequence is identical to AEE78813.
            
            On May 13, 2003 this sequence version replaced NP_190730.1.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     Protein         1..755
                     /product="PAP/OAS1 substrate-binding domain superfamily"
                     /calculated_mol_wt=84610
     Region          57..163
                     /region_name="NT_PAP_TUTase"
                     /note="Nucleotidyltransferase (NT) domain of poly(A)
                     polymerases and terminal uridylyl transferases; cd05402"
                     /db_xref="CDD:143392"
     Site            order(80..82,92..93,95,138..139,141,143,152,159..160,163)
                     /site_type="active"
                     /db_xref="CDD:143392"
     Site            order(80,138,141,143,152,159..160)
                     /site_type="active"
                     /note="putative primer-binding pocket [active]"
                     /db_xref="CDD:143392"
     Site            order(93,95,152)
                     /site_type="metal-binding"
                     /note="metal binding triad [ion binding]"
                     /db_xref="CDD:143392"
     CDS             1..755
                     /locus_tag="AT3G51620"
                     /gene_synonym="T18N14.7"
                     /coded_by="NM_115021.2:208..2475"
                     /inference="Similar to RNA sequence,
                     EST:INSD:ES170677.1,INSD:EL163096.1,INSD:ES080045.1,
                     INSD:AV565036.1,INSD:ES091104.1,INSD:AV530675.1,
                     INSD:EL274499.1,INSD:EG482820.1,INSD:EL056415.1,
                     INSD:ES108155.1,INSD:EL215917.1,INSD:AV529596.1,
                     INSD:EL037237.1,INSD:ES192405.1,INSD:AV566519.1,
                     INSD:AV440370.1,INSD:CB255520.1"
                     /note="PAP/OAS1 substrate-binding domain superfamily; BEST
                     Arabidopsis thaliana protein match is:
                     nucleotidyltransferases (TAIR:AT3G61690.1); Has 270 Blast
                     hits to 218 proteins in 57 species: Archae - 0; Bacteria -
                     2; Metazoa - 18; Fungi - 29; Plants - 185; Viruses - 0;
                     Other Eukaryotes - 36 (source: NCBI BLink)."
                     /db_xref="GeneID:824325"
                     /db_xref="TAIR:AT3G51620"
                     /db_xref="Araport:AT3G51620"
ORIGIN      
        1 maadlddlee esssslsppl lppprsplnq pelwmrveea treiieqvhp tlvsedrrrd
       61 vilyvqklir mtlgcevhsf gsvplktylp dgdidltafg glyheeelaa kvfavleree
      121 hnlssqfvvk dvqliraevk lvkclvqniv vdisfnqigg ictlcflekv lykfldyfsk
      181 fdwdsycisl ngpvclsslp divvetpeng gedllltsef lkeclemysv psrgfetnpr
      241 gfqskhlniv dplketnnlg rsvskgnfyr irsaftygar klgqlflqsd eaisselrkf
      301 fsnmllrhgs gqrpdvhdai pflrynryna ilpasnhfqe gqvvnesess sssgatgngr
      361 hdqedsldag vsipsttgpd lsgspgetvp svseerfsgd akdlatlriq kleisddamk
      421 spclsdkesd splngkhhsf nqmrngevln gngvgkqqen swhtgsrrvk dihinenene
      481 hvgyedlpfa savpwpqedm hlhysghcvs gtpnmlsdls gdyesqlnsl rfgrwwfdyv
      541 qngpmsplsp pglpqlpnnn swevmrhalp frrnaptpvn angvvprqvf fhvnpqmipg
      601 pgfgieelpk prgtgtyfpn anhyrdrpfs prgrnshqar sprnngrsms qahsemnfpd
      661 rntrerqlhy pnqtngscdm shtdsldsfp dtngstnhpy ekapdfrpte plpvevlspp
      721 edskprdsie ghhnrphrpk prpsstqeer dvhvg
//
Feature
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Protein clusters for NP_190730.2

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More about the AT3G51620 gene

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