LOCUS NP_956302 115 aa linear VRT 16-SEP-2024
DEFINITION pancreatic progenitor cell differentiation and proliferation factor
B [Danio rerio].
ACCESSION NP_956302
VERSION NP_956302.1
DBSOURCE REFSEQ: accession NM_200008.1
KEYWORDS RefSeq.
SOURCE Danio rerio (zebrafish)
ORGANISM Danio rerio
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
Cypriniformes; Danionidae; Danioninae; Danio.
REFERENCE 1 (residues 1 to 115)
AUTHORS Carril Pardo,C.A., Massoz,L., Dupont,M.A., Bergemann,D.,
Bourdouxhe,J., Lavergne,A., Tarifeno-Saldivia,E., Helker,C.S.,
Stainier,D.Y., Peers,B., Voz,M.M. and Manfroid,I.
TITLE A delta-cell subpopulation with a pro-beta-cell identity
contributes to efficient age-independent recovery in a zebrafish
model of diabetes
JOURNAL Elife 11, e67576 (2022)
PUBMED 35060900
REMARK Publication Status: Online-Only
REFERENCE 2 (residues 1 to 115)
AUTHORS Singh,S.P., Chawla,P., Hnatiuk,A., Kamel,M., Silva,L.D.,
Spanjaard,B., Eski,S.E., Janjuha,S., Olivares-Chauvet,P.,
Kayisoglu,O., Rost,F., Blasche,J., Krankel,A., Petzold,A.,
Kurth,T., Reinhardt,S., Junker,J.P. and Ninov,N.
TITLE A single-cell atlas of de novo beta-cell regeneration reveals the
contribution of hybrid beta/delta-cells to diabetes recovery in
zebrafish
JOURNAL Development 149 (2) (2022)
PUBMED 35088828
REFERENCE 3 (residues 1 to 115)
AUTHORS Ben-Yair,R., Butty,V.L., Busby,M., Qiu,Y., Levine,S.S., Goren,A.,
Boyer,L.A., Burns,C.G. and Burns,C.E.
TITLE H3K27me3-mediated silencing of structural genes is required for
zebrafish heart regeneration
JOURNAL Development 146 (19) (2019)
PUBMED 31427288
REMARK Publication Status: Online-Only
REFERENCE 4 (residues 1 to 115)
AUTHORS Tarifeno-Saldivia,E., Lavergne,A., Bernard,A., Padamata,K.,
Bergemann,D., Voz,M.L., Manfroid,I. and Peers,B.
TITLE Transcriptome analysis of pancreatic cells across distant species
highlights novel important regulator genes
JOURNAL BMC Biol 15 (1), 21 (2017)
PUBMED 28327131
REMARK Publication Status: Online-Only
REFERENCE 5 (residues 1 to 115)
AUTHORS Bayes,A., Collins,M.O., Reig-Viader,R., Gou,G., Goulding,D.,
Izquierdo,A., Choudhary,J.S., Emes,R.D. and Grant,S.G.
TITLE Evolution of complexity in the zebrafish synapse proteome
JOURNAL Nat Commun 8, 14613 (2017)
PUBMED 28252024
REMARK Publication Status: Online-Only
REFERENCE 6 (residues 1 to 115)
AUTHORS Pasquier,J., Cabau,C., Nguyen,T., Jouanno,E., Severac,D.,
Braasch,I., Journot,L., Pontarotti,P., Klopp,C., Postlethwait,J.H.,
Guiguen,Y. and Bobe,J.
TITLE Gene evolution and gene expression after whole genome duplication
in fish: the PhyloFish database
JOURNAL BMC Genomics 17, 368 (2016)
PUBMED 27189481
REMARK Publication Status: Online-Only
REFERENCE 7 (residues 1 to 115)
AUTHORS Elkon,R., Milon,B., Morrison,L., Shah,M., Vijayakumar,S.,
Racherla,M., Leitch,C.C., Silipino,L., Hadi,S., Weiss-Gayet,M.,
Barras,E., Schmid,C.D., Ait-Lounis,A., Barnes,A., Song,Y.,
Eisenman,D.J., Eliyahu,E., Frolenkov,G.I., Strome,S.E., Durand,B.,
Zaghloul,N.A., Jones,S.M., Reith,W. and Hertzano,R.
TITLE RFX transcription factors are essential for hearing in mice
JOURNAL Nat Commun 6, 8549 (2015)
PUBMED 26469318
REMARK Publication Status: Online-Only
REFERENCE 8 (residues 1 to 115)
AUTHORS Rosel,T.D., Hung,L.H., Medenbach,J., Donde,K., Starke,S., Benes,V.,
Ratsch,G. and Bindereif,A.
TITLE RNA-Seq analysis in mutant zebrafish reveals role of U1C protein in
alternative splicing regulation
JOURNAL EMBO J 30 (10), 1965-1976 (2011)
PUBMED 21468032
REFERENCE 9 (residues 1 to 115)
AUTHORS Jiang,Z., Song,J., Qi,F., Xiao,A., An,X., Liu,N.A., Zhu,Z.,
Zhang,B. and Lin,S.
TITLE Exdpf is a key regulator of exocrine pancreas development
controlled by retinoic acid and ptf1a in zebrafish
JOURNAL PLoS Biol 6 (11), e293 (2008)
PUBMED 19067490
REFERENCE 10 (residues 1 to 115)
AUTHORS Woods,I.G., Wilson,C., Friedlander,B., Chang,P., Reyes,D.K.,
Nix,R., Kelly,P.D., Chu,F., Postlethwait,J.H. and Talbot,W.S.
TITLE The zebrafish gene map defines ancestral vertebrate chromosomes
JOURNAL Genome Res 15 (9), 1307-1314 (2005)
PUBMED 16109975
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from BC059699.1.
##Evidence-Data-START##
Transcript exon combination :: CO913873.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
SAMEA4476732, SAMEA4476735
[ECO:0000348]
##Evidence-Data-END##
FEATURES Location/Qualifiers
source 1..115
/organism="Danio rerio"
/strain="wild type"
/db_xref="taxon:7955"
/chromosome="23"
/map="23"
Protein 1..115
/product="pancreatic progenitor cell differentiation and
proliferation factor B"
/note="exocrine differentiation and proliferation factor
B; chromosome 20 open reading frame 149, like; endpf;
endocrine differentiation and proliferation factor"
/calculated_mol_wt=11953
Region 1..106
/region_name="PPDFL"
/note="Differentiation and proliferation regulator;
pfam15060"
/db_xref="CDD:464477"
Region 21..48
/region_name="Disordered.
/evidence=ECO:0000256|SAM:MobiDB-lite"
/note="propagated from UniProtKB/Swiss-Prot (Q6PBI2.1)"
CDS 1..115
/gene="ppdpfb"
/gene_synonym="c20orf149b; c20orf149l; wu:fj62f01;
zgc:73395"
/coded_by="NM_200008.1:166..513"
/db_xref="GeneID:336303"
/db_xref="ZFIN:ZDB-GENE-030131-8247"
ORIGIN
1 maaipasgsl vathdyyrrr igstsssssc gsseysgevi phhpglpkqd sghwwssfff
61 gkqnlpgmgt vaeeaqqksg vvsvtngqvt cvaremvmrq asessdggks eagns
//