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tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB [Lactococcus lactis subsp. lactis]

GenBank: ONK32818.1

Identical Proteins FASTA Graphics 

LOCUS       ONK32818                 241 aa            linear   BCT 05-FEB-2017
DEFINITION  tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex
            dimerization subunit type 1 TsaB [Lactococcus lactis subsp.
            lactis].
ACCESSION   ONK32818
VERSION     ONK32818.1
DBLINK      BioProject: PRJNA369137
            BioSample: SAMN06277565
DBSOURCE    accession MUBH01000002.1
KEYWORDS    .
SOURCE      Lactococcus lactis subsp. lactis
  ORGANISM  Lactococcus lactis subsp. lactis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Lactococcus.
REFERENCE   1  (residues 1 to 241)
  AUTHORS   Silva,I.N., Duarte,S., Moreira,L.M. and Monteiro,G.A.
  TITLE     Draft genome of a plasmid-free Lactococcus lactis subsp. lactis
            LMG19460
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 241)
  AUTHORS   Silva,I.N., Duarte,S., Moreira,L.M. and Monteiro,G.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-JAN-2017) Institute for Bioengineering and
            Biosciences, Instituto Superior Tecnico, Av. Rovisco Pais, Lisboa
            1000-049, Portugal
COMMENT     Bacteria and source DNA available from Gabriel Monteiro, Institute
            for Bioengineering and Biosciences, Instituto Superior Tecnico,
            Universidade de Lisboa, Portugal.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 18-JAN-2017
            Assembly Method        :: SPAdes v. 3.8.0; HGA v. 1.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 140.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/30/2017 09:40:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.0
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,310
            CDS (total)                       :: 2,249
            Genes (coding)                    :: 2,171
            CDS (coding)                      :: 2,171
            Genes (RNA)                       :: 61
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 37 of 78
            Pseudo Genes (incomplete)         :: 19 of 78
            Pseudo Genes (internal stop)      :: 29 of 78
            Pseudo Genes (multiple problems)  :: 6 of 78
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Lactococcus lactis subsp. lactis"
                     /strain="LMG 19460"
                     /isolation_source="starter culture"
                     /sub_species="lactis"
                     /culture_collection="LMG:19460"
                     /db_xref="taxon:1360"
                     /geo_loc_name="Germany"
                     /collection_date="1979"
     Protein         1..241
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
     Region          1..227
                     /region_name="TsaB"
                     /note="tRNA A37 threonylcarbamoyladenosine modification
                     protein TsaB [Translation, ribosomal structure and
                     biogenesis]; COG1214"
                     /db_xref="CDD:440827"
     CDS             1..241
                     /locus_tag="BZO99_02415"
                     /coded_by="complement(MUBH01000002.1:80648..81373)"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_266448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
ORIGIN      
        1 mkilafdsss kalsvavvad gillgevtln lkknhsttlm tsidflmaqv gleakeldri
       61 avaqgpgsyt glrlsatvgk tlafslnkel vglssllaia nrvqdknayv lpiidarrgn
      121 ayaalykngq qiiadqhcnf sefladlsek vssfeqiift getdnfveai qnagfseeqi
      181 isdsleklps ayeiakiaek lapenvhafv pnylkkveae ekwlesheka entpddyvqr
      241 v
//
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