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GenBank: ONK32818.1
Identical Proteins FASTA Graphics
LOCUS ONK32818 241 aa linear BCT 05-FEB-2017 DEFINITION tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB [Lactococcus lactis subsp. lactis]. ACCESSION ONK32818 VERSION ONK32818.1 DBLINK BioProject: PRJNA369137 BioSample: SAMN06277565 DBSOURCE accession MUBH01000002.1 KEYWORDS . SOURCE Lactococcus lactis subsp. lactis ORGANISM Lactococcus lactis subsp. lactis Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus. REFERENCE 1 (residues 1 to 241) AUTHORS Silva,I.N., Duarte,S., Moreira,L.M. and Monteiro,G.A. TITLE Draft genome of a plasmid-free Lactococcus lactis subsp. lactis LMG19460 JOURNAL Unpublished REFERENCE 2 (residues 1 to 241) AUTHORS Silva,I.N., Duarte,S., Moreira,L.M. and Monteiro,G.A. TITLE Direct Submission JOURNAL Submitted (28-JAN-2017) Institute for Bioengineering and Biosciences, Instituto Superior Tecnico, Av. Rovisco Pais, Lisboa 1000-049, Portugal COMMENT Bacteria and source DNA available from Gabriel Monteiro, Institute for Bioengineering and Biosciences, Instituto Superior Tecnico, Universidade de Lisboa, Portugal. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 18-JAN-2017 Assembly Method :: SPAdes v. 3.8.0; HGA v. 1.0 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 140.0x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 01/30/2017 09:40:21 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 2,310 CDS (total) :: 2,249 Genes (coding) :: 2,171 CDS (coding) :: 2,171 Genes (RNA) :: 61 rRNAs :: 4, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) partial rRNAs :: 2 (5S) tRNAs :: 51 ncRNAs :: 4 Pseudo Genes (total) :: 78 Pseudo Genes (ambiguous residues) :: 0 of 78 Pseudo Genes (frameshifted) :: 37 of 78 Pseudo Genes (incomplete) :: 19 of 78 Pseudo Genes (internal stop) :: 29 of 78 Pseudo Genes (multiple problems) :: 6 of 78 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..241 /organism="Lactococcus lactis subsp. lactis" /strain="LMG 19460" /isolation_source="starter culture" /sub_species="lactis" /culture_collection="LMG:19460" /db_xref="taxon:1360" /geo_loc_name="Germany" /collection_date="1979" Protein 1..241 /product="tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB" Region 1..227 /region_name="TsaB" /note="tRNA A37 threonylcarbamoyladenosine modification protein TsaB [Translation, ribosomal structure and biogenesis]; COG1214" /db_xref="CDD:440827" CDS 1..241 /locus_tag="BZO99_02415" /coded_by="complement(MUBH01000002.1:80648..81373)" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_266448.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 ORIGIN 1 mkilafdsss kalsvavvad gillgevtln lkknhsttlm tsidflmaqv gleakeldri 61 avaqgpgsyt glrlsatvgk tlafslnkel vglssllaia nrvqdknayv lpiidarrgn 121 ayaalykngq qiiadqhcnf sefladlsek vssfeqiift getdnfveai qnagfseeqi 181 isdsleklps ayeiakiaek lapenvhafv pnylkkveae ekwlesheka entpddyvqr 241 v //
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Conserved Domains
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