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hypothetical protein A9K83_17545 [Enterobacter kobei]

GenBank: OUS63985.1

Identical Proteins FASTA Graphics 

LOCUS       OUS63985                  74 aa            linear   BCT 07-JAN-2019
DEFINITION  hypothetical protein A9K83_17545 [Enterobacter kobei].
ACCESSION   OUS63985
VERSION     OUS63985.1
DBLINK      BioProject: PRJNA322832
            BioSample: SAMN05173299
DBSOURCE    accession LYUR01000006.1
KEYWORDS    .
SOURCE      Enterobacter kobei
  ORGANISM  Enterobacter kobei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 74)
  AUTHORS   Zhou,K., Yu,W., Bonnet,R., Cattoir,V., Shen,P., Wang,B.,
            Rossen,J.W. and Xiao,Y.
  TITLE     Emergence of a novel Enterobacter kobei clone carrying
            chromosomal-encoded CTX-M-12 with diversified pathogenicity in
            northeast China
  JOURNAL   New Microbes New Infect 17, 7-10 (2017)
   PUBMED   28243445
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 74)
  AUTHORS   Zhou,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAY-2016) The First Affiliated Hospital, Zhejiang
            University, Qingchun 79, Hangzhou 310003, China
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            The organism was changed from 'Enterobacter cloacae' to
            'Enterobacter kobei' in January 2019.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_002165535.1
            Current Name        :: Enterobacter kobei
            Previous Name       :: Enterobacter cloacae
            Date Updated        :: 2019-01-07
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_001729765.1
            A1 Name             :: Enterobacter kobei
            A1 ANI              :: 99.12429%
            A1 Query Coverage   :: 85.97%
            A1 Subject Coverage :: 86.13%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_000755525.1
            A2 Name             :: Enterobacter cloacae
            A2 ANI              :: 88.43079%
            A2 Query Coverage   :: 81.67%
            A2 Subject Coverage :: 72.62%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 260.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 05/31/2016 13:00:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 3.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 4,732
            CDS (total)                       :: 4,651
            Genes (coding)                    :: 4,567
            CDS (coding)                      :: 4,567
            Genes (RNA)                       :: 81
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 84
            Pseudo Genes (ambiguous residues) :: 0 of 84
            Pseudo Genes (frameshifted)       :: 22 of 84
            Pseudo Genes (incomplete)         :: 46 of 84
            Pseudo Genes (internal stop)      :: 22 of 84
            Pseudo Genes (multiple problems)  :: 5 of 84
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Enterobacter kobei"
                     /strain="ECC3018"
                     /isolation_source="Bronchoalvelar lavage (BAL)"
                     /host="Homo sapiens"
                     /db_xref="taxon:208224"
                     /geo_loc_name="China: Liaoning"
                     /lat_lon="41.8057 N 123.43153 E"
                     /collection_date="Aug-2011"
                     /collected_by="Yonghong Xiao"
     Protein         1..74
                     /product="hypothetical protein"
     CDS             1..74
                     /locus_tag="A9K83_17545"
                     /coded_by="complement(LYUR01000006.1:179942..180166)"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_009307825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
ORIGIN      
        1 mgnpilekti vifllilwii safrarkrkc sdpaieaada rerhewryfr wgfrtiqvaa
       61 tiyifvqlfq vlmr
//
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Reference sequence information

  • RefSeq protein
    See the reference protein sequence for MULTISPECIES: hypothetical protein (WP_014883667.1).

More about the gene LCD42_RS09870

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