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aminomethyltransferase [Cronobacter sakazakii]

GenBank: PPY43326.1

Identical Proteins FASTA Graphics 

LOCUS       PPY43326                 365 aa            linear   BCT 25-FEB-2018
DEFINITION  aminomethyltransferase [Cronobacter sakazakii].
ACCESSION   PPY43326
VERSION     PPY43326.1
DBLINK      BioProject: PRJNA258403
            BioSample: SAMN08397401
DBSOURCE    accession PTOZ01000010.1
KEYWORDS    .
SOURCE      Cronobacter sakazakii
  ORGANISM  Cronobacter sakazakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (residues 1 to 365)
  AUTHORS   Jang,H., Woo,J., Lee,Y., Gopinath,G. and Tall,B.
  TITLE     Whole Genome Sequences of Thirty Cronobacter sakazakii Isolates
            obtained from Plant-origin Foods and Dried Food Manufacturing
            Environments
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 365)
  AUTHORS   Jang,H., Woo,J., Lee,Y., Gopinath,G. and Tall,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-FEB-2018) US FDA, CFSAN, 8301 Muirkirk Road, Laurel,
            MD 20708, USA
COMMENT     Bacteria available from ben.tall@fda.hhs.gov.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 02/20/2018 17:31:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.4
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 4,255
            CDS (total)                       :: 4,171
            Genes (coding)                    :: 4,090
            CDS (coding)                      :: 4,090
            Genes (RNA)                       :: 84
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 69
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 33 of 81
            Pseudo Genes (incomplete)         :: 40 of 81
            Pseudo Genes (internal stop)      :: 22 of 81
            Pseudo Genes (multiple problems)  :: 14 of 81
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Cronobacter sakazakii"
                     /strain="MOD1_LR707"
                     /isolation_source="Food, Organic Hi PDI Flour"
                     /db_xref="taxon:28141"
                     /geo_loc_name="USA: IL"
                     /collection_date="2006"
                     /collected_by="MOD1"
     Protein         1..365
                     /product="aminomethyltransferase"
     Region          1..362
                     /region_name="gcvT"
                     /note="glycine cleavage system aminomethyltransferase
                     GcvT; PRK00389"
                     /db_xref="CDD:234742"
     CDS             1..365
                     /gene="gcvT"
                     /locus_tag="C3D74_17175"
                     /coded_by="complement(PTOZ01000010.1:68001..69098)"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004385666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
ORIGIN      
        1 maqqtplyeq hnlcgarmvd fhgwmmplhy gsqidehhav rndagmfdvs hmtivdlrga
       61 rtreflryll andvakltqp gkalytamln asggviddli vyfmtedyfr lvvnsatrek
      121 dlawinehae pygvsvtvrd dlsliavqgp nakakaatlf tdaqrkateg mkpffgvqad
      181 dlfiattgyt geagyeiamp nekaagfwsq lveagvkpcg lgardtlrle agmnlygqem
      241 degvsplaan mgwtiawqpe drafigrdal eaqrengteq lvglvmtekg vlrgelpvrf
      301 tddqgnareg iitsgtfspt lgysialarv pagigdtaiv qirnrempvk vtkpifvrag
      361 kpvtq
//
Feature
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