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GenBank: PPY43326.1
Identical Proteins FASTA Graphics
LOCUS PPY43326 365 aa linear BCT 25-FEB-2018 DEFINITION aminomethyltransferase [Cronobacter sakazakii]. ACCESSION PPY43326 VERSION PPY43326.1 DBLINK BioProject: PRJNA258403 BioSample: SAMN08397401 DBSOURCE accession PTOZ01000010.1 KEYWORDS . SOURCE Cronobacter sakazakii ORGANISM Cronobacter sakazakii Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Cronobacter. REFERENCE 1 (residues 1 to 365) AUTHORS Jang,H., Woo,J., Lee,Y., Gopinath,G. and Tall,B. TITLE Whole Genome Sequences of Thirty Cronobacter sakazakii Isolates obtained from Plant-origin Foods and Dried Food Manufacturing Environments JOURNAL Unpublished REFERENCE 2 (residues 1 to 365) AUTHORS Jang,H., Woo,J., Lee,Y., Gopinath,G. and Tall,B. TITLE Direct Submission JOURNAL Submitted (16-FEB-2018) US FDA, CFSAN, 8301 Muirkirk Road, Laurel, MD 20708, USA COMMENT Bacteria available from ben.tall@fda.hhs.gov. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC NGS Cell v. 9.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 50x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 02/20/2018 17:31:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.4 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 4,255 CDS (total) :: 4,171 Genes (coding) :: 4,090 CDS (coding) :: 4,090 Genes (RNA) :: 84 rRNAs :: 4, 1, 1 (5S, 16S, 23S) complete rRNAs :: 3, 1, 1 (5S, 16S, 23S) partial rRNAs :: 1 (5S) tRNAs :: 69 ncRNAs :: 9 Pseudo Genes (total) :: 81 Pseudo Genes (ambiguous residues) :: 0 of 81 Pseudo Genes (frameshifted) :: 33 of 81 Pseudo Genes (incomplete) :: 40 of 81 Pseudo Genes (internal stop) :: 22 of 81 Pseudo Genes (multiple problems) :: 14 of 81 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..365 /organism="Cronobacter sakazakii" /strain="MOD1_LR707" /isolation_source="Food, Organic Hi PDI Flour" /db_xref="taxon:28141" /geo_loc_name="USA: IL" /collection_date="2006" /collected_by="MOD1" Protein 1..365 /product="aminomethyltransferase" Region 1..362 /region_name="gcvT" /note="glycine cleavage system aminomethyltransferase GcvT; PRK00389" /db_xref="CDD:234742" CDS 1..365 /gene="gcvT" /locus_tag="C3D74_17175" /coded_by="complement(PTOZ01000010.1:68001..69098)" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_004385666.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 ORIGIN 1 maqqtplyeq hnlcgarmvd fhgwmmplhy gsqidehhav rndagmfdvs hmtivdlrga 61 rtreflryll andvakltqp gkalytamln asggviddli vyfmtedyfr lvvnsatrek 121 dlawinehae pygvsvtvrd dlsliavqgp nakakaatlf tdaqrkateg mkpffgvqad 181 dlfiattgyt geagyeiamp nekaagfwsq lveagvkpcg lgardtlrle agmnlygqem 241 degvsplaan mgwtiawqpe drafigrdal eaqrengteq lvglvmtekg vlrgelpvrf 301 tddqgnareg iitsgtfspt lgysialarv pagigdtaiv qirnrempvk vtkpifvrag 361 kpvtq //
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Conserved Domains
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