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glycoside hydrolase family 105 protein [Klebsiella pneumoniae]

GenBank: PTA59855.1

Identical Proteins FASTA Graphics 

LOCUS       PTA59855                 379 aa            linear   BCT 01-APR-2018
DEFINITION  glycoside hydrolase family 105 protein [Klebsiella pneumoniae].
ACCESSION   PTA59855
VERSION     PTA59855.1
DBLINK      BioProject: PRJNA400267
            BioSample: SAMN08793705
DBSOURCE    accession PYSL01000013.1
KEYWORDS    .
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group;
            Klebsiella; Klebsiella pneumoniae complex.
REFERENCE   1  (residues 1 to 379)
  AUTHORS   Veeraraghavan,B., Shankar,C., Venkatesan,M. and Raj,A.
  TITLE     Colistin resistant Klebsiella pneumoniae VBA2612
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 379)
  AUTHORS   Veeraraghavan,B., Shankar,C., Venkatesan,M. and Raj,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2018) Clinical Microbiology, Christian Medical
            College, Ida Scudder Road, Vellore, Tamil nadu 632004, India
COMMENT     Bacteria and source DNA available from Department of Clinical
            Microbiology, Christian Medical College, Vellore, India.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2018
            Assembly Method        :: SPAdes v. 5.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 81.0x
            Sequencing Technology  :: IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/27/2018 11:13:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.4
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 5,761
            CDS (total)                       :: 5,653
            Genes (coding)                    :: 5,125
            CDS (coding)                      :: 5,125
            Genes (RNA)                       :: 108
            rRNAs                             :: 9, 5, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5, 4, 7 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 528
            Pseudo Genes (ambiguous residues) :: 0 of 528
            Pseudo Genes (frameshifted)       :: 418 of 528
            Pseudo Genes (incomplete)         :: 120 of 528
            Pseudo Genes (internal stop)      :: 48 of 528
            Pseudo Genes (multiple problems)  :: 55 of 528
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Klebsiella pneumoniae"
                     /strain="VBA2612"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="India"
                     /lat_lon="12.9165 N 79.1325 E"
                     /collection_date="2018"
                     /collected_by="Christian Medical College, Vellore, India"
     Protein         1..379
                     /product="glycoside hydrolase family 105 protein"
     Region          49..376
                     /region_name="YesR"
                     /note="Rhamnogalacturonyl hydrolase YesR [Carbohydrate
                     transport and metabolism]; COG4225"
                     /db_xref="CDD:443369"
     CDS             1..379
                     /locus_tag="C9I60_12140"
                     /coded_by="PYSL01000013.1:46802..47941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_004594762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
ORIGIN      
        1 mkvwpvkhsp llrqperfia rselqalirn vtqnlvnikd esgqfllrld dgrvidtkgw
       61 agwewthgvg lygiyqyyqq tgdiemrdii drwfadrfae gattknvntm apfltlayrf
      121 eetgrmaylp wleswaewam hemprteqgg mqhmtlaeen hqqmwddtlm mtvlplakig
      181 kllnrpqyve eaiyqfllhv qnlmdretgl wfhgwnyegr hnfararwar gnswltmvip
      241 dflelvdlpe gnavrrylit vldaqiaala kcqddsglwh tllddphsyl easatagfay
      301 gilkavrkry vgqhyagvae kairgivqni spqgellqts fgtgmgsdld fyrqipltsm
      361 pygqamailc lteylrkyf
//
Feature
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