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GenBank: PTA59855.1
Identical Proteins FASTA Graphics
LOCUS PTA59855 379 aa linear BCT 01-APR-2018 DEFINITION glycoside hydrolase family 105 protein [Klebsiella pneumoniae]. ACCESSION PTA59855 VERSION PTA59855.1 DBLINK BioProject: PRJNA400267 BioSample: SAMN08793705 DBSOURCE accession PYSL01000013.1 KEYWORDS . SOURCE Klebsiella pneumoniae ORGANISM Klebsiella pneumoniae Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella; Klebsiella pneumoniae complex. REFERENCE 1 (residues 1 to 379) AUTHORS Veeraraghavan,B., Shankar,C., Venkatesan,M. and Raj,A. TITLE Colistin resistant Klebsiella pneumoniae VBA2612 JOURNAL Unpublished REFERENCE 2 (residues 1 to 379) AUTHORS Veeraraghavan,B., Shankar,C., Venkatesan,M. and Raj,A. TITLE Direct Submission JOURNAL Submitted (25-MAR-2018) Clinical Microbiology, Christian Medical College, Ida Scudder Road, Vellore, Tamil nadu 632004, India COMMENT Bacteria and source DNA available from Department of Clinical Microbiology, Christian Medical College, Vellore, India. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2018 Assembly Method :: SPAdes v. 5.0 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 81.0x Sequencing Technology :: IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 03/27/2018 11:13:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.4 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 5,761 CDS (total) :: 5,653 Genes (coding) :: 5,125 CDS (coding) :: 5,125 Genes (RNA) :: 108 rRNAs :: 9, 5, 8 (5S, 16S, 23S) complete rRNAs :: 4, 1, 1 (5S, 16S, 23S) partial rRNAs :: 5, 4, 7 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 11 Pseudo Genes (total) :: 528 Pseudo Genes (ambiguous residues) :: 0 of 528 Pseudo Genes (frameshifted) :: 418 of 528 Pseudo Genes (incomplete) :: 120 of 528 Pseudo Genes (internal stop) :: 48 of 528 Pseudo Genes (multiple problems) :: 55 of 528 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..379 /organism="Klebsiella pneumoniae" /strain="VBA2612" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:573" /geo_loc_name="India" /lat_lon="12.9165 N 79.1325 E" /collection_date="2018" /collected_by="Christian Medical College, Vellore, India" Protein 1..379 /product="glycoside hydrolase family 105 protein" Region 49..376 /region_name="YesR" /note="Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism]; COG4225" /db_xref="CDD:443369" CDS 1..379 /locus_tag="C9I60_12140" /coded_by="PYSL01000013.1:46802..47941" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_004594762.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 ORIGIN 1 mkvwpvkhsp llrqperfia rselqalirn vtqnlvnikd esgqfllrld dgrvidtkgw 61 agwewthgvg lygiyqyyqq tgdiemrdii drwfadrfae gattknvntm apfltlayrf 121 eetgrmaylp wleswaewam hemprteqgg mqhmtlaeen hqqmwddtlm mtvlplakig 181 kllnrpqyve eaiyqfllhv qnlmdretgl wfhgwnyegr hnfararwar gnswltmvip 241 dflelvdlpe gnavrrylit vldaqiaala kcqddsglwh tllddphsyl easatagfay 301 gilkavrkry vgqhyagvae kairgivqni spqgellqts fgtgmgsdld fyrqipltsm 361 pygqamailc lteylrkyf //
Whole sequence Selected region from: to:
Conserved Domains
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