LOCUS QXB34394 136 aa linear BCT 28-JUN-2021
DEFINITION formate hydrogenlyase maturation HycH family protein [Enterobacter
hormaechei].
ACCESSION QXB34394
VERSION QXB34394.1
DBLINK BioProject: PRJNA231221
BioSample: SAMN16357575
DBSOURCE accession CP077308.1
KEYWORDS .
SOURCE Enterobacter hormaechei
ORGANISM Enterobacter hormaechei
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
cloacae complex.
REFERENCE 1 (residues 1 to 136)
AUTHORS Sproer,C., Gronow,S., Severitt,S., Schroder,I., Tallon,L.,
Sadzewicz,L., Zhao,X., Boylan,J., Ott,S., Bowen,H., Vavikolanu,K.,
Mehta,A., Aluvathingal,J., Nadendla,S., Lowell,S., Myers,T. and
Yan,Y.
TITLE FDA dAtabase for Regulatory Grade micrObial Sequences (FDA-ARGOS):
Supporting development and validation of Infectious Disease Dx
tests
JOURNAL Unpublished
REFERENCE 2 (residues 1 to 136)
AUTHORS Sproer,C., Gronow,S., Severitt,S., Schroder,I., Tallon,L.,
Sadzewicz,L., Zhao,X., Boylan,J., Ott,S., Bowen,H., Vavikolanu,K.,
Mehta,A., Aluvathingal,J., Nadendla,S., Lowell,S., Myers,T. and
Yan,Y.
TITLE Direct Submission
JOURNAL Submitted (17-JUN-2021) Center for Devices and Radiological Health,
US Food and Drug Administration, 10903 New Hampshire Avenue, White
Oak, MD 20903, USA
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 06/21/2021 16:51:35
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 5.2
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 4,747
CDSs (total) :: 4,626
Genes (coding) :: 4,552
CDSs (with protein) :: 4,552
Genes (RNA) :: 121
rRNAs :: 9, 8, 8 (5S, 16S, 23S)
complete rRNAs :: 9, 8, 8 (5S, 16S, 23S)
tRNAs :: 90
ncRNAs :: 6
Pseudo Genes (total) :: 74
CDSs (without protein) :: 74
Pseudo Genes (ambiguous residues) :: 0 of 74
Pseudo Genes (frameshifted) :: 38 of 74
Pseudo Genes (incomplete) :: 32 of 74
Pseudo Genes (internal stop) :: 13 of 74
Pseudo Genes (multiple problems) :: 9 of 74
CRISPR Arrays :: 1
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..136
/organism="Enterobacter hormaechei"
/strain="FDAARGOS 1433"
/culture_collection="DSM:12409"
/type_material="type strain of Enterobacter hormaechei"
/db_xref="taxon:158836"
/geo_loc_name="Germany: Braunschweig"
/collected_by="DSMZ"
Protein 1..136
/product="formate hydrogenlyase maturation HycH family
protein"
Region 1..134
/region_name="PRK15084"
/note="formate hydrogenlyase maturation protein HycH;
Provisional"
/db_xref="CDD:185042"
CDS 1..136
/locus_tag="I6L63_03665"
/coded_by="CP077308.1:749227..749637"
/inference="COORDINATES: similar to AA
sequence:RefSeq:YP_005228428.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
ORIGIN
1 msetvvfsql srkfidenda tpdaaqqvvy yslaighhlg vidcletals cpwpeylawi
61 atleegstar rkmegvpkyg eividanhit mlanafdaal srqtpaqqaw sktllgmlhd
121 ihqesaiylm vrrlrd
//