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hypothetical protein DVH09_20845 [Hafnia paralvei]

GenBank: RDA62741.1

Identical Proteins FASTA Graphics 

LOCUS       RDA62741                 211 aa            linear   BCT 24-JUL-2018
DEFINITION  hypothetical protein DVH09_20845 [Hafnia paralvei].
ACCESSION   RDA62741
VERSION     RDA62741.1
DBLINK      BioProject: PRJNA481542
            BioSample: SAMN09681893
DBSOURCE    accession QPIT01000119.1
KEYWORDS    .
SOURCE      Hafnia paralvei
  ORGANISM  Hafnia paralvei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Hafniaceae; Hafnia.
REFERENCE   1  (residues 1 to 211)
  AUTHORS   Zhang,S., Chaluvadi,S. and Bennetzen,J.L.
  TITLE     Genome sequence comparisons of six Hafnia isolates from Sarracenia
            pitcher plants
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 211)
  AUTHORS   Zhang,S., Chaluvadi,S. and Bennetzen,J.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2018) Department of Genetics, University of
            Georgia, University of Georgia, Athens, GA 30602, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 300.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 07/19/2018 16:25:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 4,389
            CDS (total)                       :: 4,308
            Genes (coding)                    :: 4,223
            CDS (coding)                      :: 4,223
            Genes (RNA)                       :: 81
            rRNAs                             :: 2, 2 (16S, 23S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 85
            Pseudo Genes (ambiguous residues) :: 0 of 85
            Pseudo Genes (frameshifted)       :: 43 of 85
            Pseudo Genes (incomplete)         :: 43 of 85
            Pseudo Genes (internal stop)      :: 29 of 85
            Pseudo Genes (multiple problems)  :: 28 of 85
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Hafnia paralvei"
                     /strain="C5"
                     /isolation_source="pitcher plants"
                     /host="Sarracenia"
                     /db_xref="taxon:546367"
                     /geo_loc_name="USA"
                     /collection_date="06-Nov-2010"
     Protein         1..211
                     /product="hypothetical protein"
     Region          43..147
                     /region_name="IbrB_like"
                     /note="immunoglobulin-binding regulator IbrB activates eib
                     genes; cd16397"
                     /db_xref="CDD:319255"
     CDS             1..211
                     /locus_tag="DVH09_20845"
                     /coded_by="complement(QPIT01000119.1:83393..84028)"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008813342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
ORIGIN      
        1 mkidtlvndl kvelesmpea ikiealnkir vmlhqvspfs nepidcvlwk siedvvandy
       61 npnnvappek rllytsllrd gytqpivtaq ikdddkdyvi vdgfhrrela adrpklrkrv
      121 rgylpvviln dlenekshri aatirhnrar gkhqisimsd ivrelyrlgw sdekiseelg
      181 mdadevlrlk qisglmelfq drefseawtv k
//
Feature
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