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MAG: hypothetical protein DRP84_00170 [Spirochaetota bacterium]

GenBank: RKX96719.1

Identical Proteins FASTA Graphics 

LOCUS       RKX96719                 218 aa            linear   ENV 15-OCT-2018
DEFINITION  MAG: hypothetical protein DRP84_00170 [Spirochaetota bacterium].
ACCESSION   RKX96719
VERSION     RKX96719.1
DBLINK      BioProject: PRJNA362212
            BioSample: SAMN09215293
DBSOURCE    accession QNBN01000001.1
KEYWORDS    ENV; Metagenome Assembled Genome; MAG.
SOURCE      Spirochaetota bacterium (marine sediment metagenome)
  ORGANISM  Spirochaetota bacterium
            Bacteria; Pseudomonadati; Spirochaetota.
REFERENCE   1  (residues 1 to 218)
  AUTHORS   Dombrowski,N., Teske,A. and Baker,B.J.
  TITLE     Extensive metabolic versatility and redundancy in microbially
            diverse, dynamic hydrothermal sediments
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 218)
  AUTHORS   Dombrowski,N., Seitz,K.W., Teske,A. and Baker,B.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUN-2018) Marine Science Institute, The University of
            Texas at Austin, 750 Channel View Dr, Port Aransas, TX 78373, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: APR-2017
            Assembly Method        :: megahit v. 1.0.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 26.8429118773946x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 06/30/2018 17:44:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.5
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,546
            CDS (total)                       :: 2,494
            Genes (coding)                    :: 2,476
            CDS (coding)                      :: 2,476
            Genes (RNA)                       :: 52
            rRNAs                             :: 2 (16S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 18
            Pseudo Genes (ambiguous residues) :: 0 of 18
            Pseudo Genes (frameshifted)       :: 7 of 18
            Pseudo Genes (incomplete)         :: 12 of 18
            Pseudo Genes (internal stop)      :: 2 of 18
            Pseudo Genes (multiple problems)  :: 2 of 18
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Spirochaetota bacterium"
                     /isolate="B62_G9"
                     /isolation_source="deep-sea hydrothermal vent sediments
                     from dive 4571_4 depth 0-3 cm"
                     /db_xref="taxon:2202144"
                     /environmental_sample
                     /geo_loc_name="Mexico: Guaymas Basin, Gulf of California"
                     /lat_lon="29.52416667 N 113.57000000 W"
                     /collection_date="02-Dec-2009"
                     /metagenome_source="marine sediment metagenome"
                     /note="metagenomic"
     Protein         1..218
                     /product="hypothetical protein"
     CDS             1..218
                     /locus_tag="DRP84_00170"
                     /coded_by="complement(QNBN01000001.1:34702..35358)"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /transl_table=11
ORIGIN      
        1 mkkwyyflfa mffiltgvfi dryvvttkta mandsfviaq atnqtksktk grgstrtwvv
       61 kidstiitld eferefsvhv yslpadpkqk aqykkseank kkflsnline yliykkaiae
      121 gydkkpfvkd llkavtrrai iqvylndkie pklrepsdqe ieaiynqnkk lftgvdidva
      181 rqqirmqllq rqynqylsel idelkgaakv irneninl
//
Feature
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