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GenBank: RKX96719.1
Identical Proteins FASTA Graphics
LOCUS RKX96719 218 aa linear ENV 15-OCT-2018 DEFINITION MAG: hypothetical protein DRP84_00170 [Spirochaetota bacterium]. ACCESSION RKX96719 VERSION RKX96719.1 DBLINK BioProject: PRJNA362212 BioSample: SAMN09215293 DBSOURCE accession QNBN01000001.1 KEYWORDS ENV; Metagenome Assembled Genome; MAG. SOURCE Spirochaetota bacterium (marine sediment metagenome) ORGANISM Spirochaetota bacterium Bacteria; Pseudomonadati; Spirochaetota. REFERENCE 1 (residues 1 to 218) AUTHORS Dombrowski,N., Teske,A. and Baker,B.J. TITLE Extensive metabolic versatility and redundancy in microbially diverse, dynamic hydrothermal sediments JOURNAL Unpublished REFERENCE 2 (residues 1 to 218) AUTHORS Dombrowski,N., Seitz,K.W., Teske,A. and Baker,B.J. TITLE Direct Submission JOURNAL Submitted (08-JUN-2018) Marine Science Institute, The University of Texas at Austin, 750 Channel View Dr, Port Aransas, TX 78373, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: APR-2017 Assembly Method :: megahit v. 1.0.6 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 26.8429118773946x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/30/2018 17:44:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 2,546 CDS (total) :: 2,494 Genes (coding) :: 2,476 CDS (coding) :: 2,476 Genes (RNA) :: 52 rRNAs :: 2 (16S) partial rRNAs :: 2 (16S) tRNAs :: 46 ncRNAs :: 4 Pseudo Genes (total) :: 18 Pseudo Genes (ambiguous residues) :: 0 of 18 Pseudo Genes (frameshifted) :: 7 of 18 Pseudo Genes (incomplete) :: 12 of 18 Pseudo Genes (internal stop) :: 2 of 18 Pseudo Genes (multiple problems) :: 2 of 18 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..218 /organism="Spirochaetota bacterium" /isolate="B62_G9" /isolation_source="deep-sea hydrothermal vent sediments from dive 4571_4 depth 0-3 cm" /db_xref="taxon:2202144" /environmental_sample /geo_loc_name="Mexico: Guaymas Basin, Gulf of California" /lat_lon="29.52416667 N 113.57000000 W" /collection_date="02-Dec-2009" /metagenome_source="marine sediment metagenome" /note="metagenomic" Protein 1..218 /product="hypothetical protein" CDS 1..218 /locus_tag="DRP84_00170" /coded_by="complement(QNBN01000001.1:34702..35358)" /inference="COORDINATES: ab initio prediction:GeneMarkS+" /note="Derived by automated computational analysis using gene prediction method: GeneMarkS+." /transl_table=11 ORIGIN 1 mkkwyyflfa mffiltgvfi dryvvttkta mandsfviaq atnqtksktk grgstrtwvv 61 kidstiitld eferefsvhv yslpadpkqk aqykkseank kkflsnline yliykkaiae 121 gydkkpfvkd llkavtrrai iqvylndkie pklrepsdqe ieaiynqnkk lftgvdidva 181 rqqirmqllq rqynqylsel idelkgaakv irneninl //
Whole sequence Selected region from: to:
Conserved Domains
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