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MFS transporter [Klebsiella pneumoniae]

GenBank: RNQ06004.1

Identical Proteins FASTA Graphics 

LOCUS       RNQ06004                 451 aa            linear   BCT 14-NOV-2018
DEFINITION  MFS transporter [Klebsiella pneumoniae].
ACCESSION   RNQ06004
VERSION     RNQ06004.1
DBLINK      BioProject: PRJNA339843
            BioSample: SAMN05956134
DBSOURCE    accession MPYM04000004.1
KEYWORDS    .
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group;
            Klebsiella.
REFERENCE   1  (residues 1 to 451)
  AUTHORS   Wright,M., Sutton,G., Venepally,P., Van,D., Rojas,L., Hujer,A.,
            Hujer,K., Bonomo,R. and Adams,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-NOV-2016) Informatics Core Services, JCVI, 9704
            Medical Center Drive, Rockville, MD 20850, USA
REFERENCE   2  (residues 1 to 451)
  AUTHORS   Vanduin,D., Fouts,D., Wright,M., Sutton,G., Nguyen,K.,
            Kreiswirth,B., Chen,L., Rojas,L., Hujer,A., Hujer,K., Bonomo,R. and
            Adams,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-OCT-2018) Informatics Core Services, JCVI, 9605
            Medical Center Drive, Rockville, MD 20850, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 304.4x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 11/03/2018 10:58:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 5,510
            CDS (total)                       :: 5,412
            Genes (coding)                    :: 5,286
            CDS (coding)                      :: 5,286
            Genes (RNA)                       :: 98
            rRNAs                             :: 8, 3, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8 (5S)
            partial rRNAs                     :: 3, 8 (16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 126
            Pseudo Genes (ambiguous residues) :: 0 of 126
            Pseudo Genes (frameshifted)       :: 55 of 126
            Pseudo Genes (incomplete)         :: 78 of 126
            Pseudo Genes (internal stop)      :: 22 of 126
            Pseudo Genes (multiple problems)  :: 26 of 126
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Klebsiella pneumoniae"
                     /strain="CRK0120"
                     /isolation_source="wound"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="USA: Ohio"
                     /collection_date="2014"
     Protein         1..451
                     /product="MFS transporter"
     Region          25..435
                     /region_name="MFS_PcaK_like"
                     /note="4-hydroxybenzoate transporter PcaK and similar
                     transporters of the Major Facilitator Superfamily;
                     cd17365"
                     /db_xref="CDD:340923"
     Site            order(35..36,39..40,43,75,125..126,128..130,133,153,
                     156..157,160,264,267..268,271..273,276,303,307,357..358,
                     362,366,382,385..386,389..390,393)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340923"
     CDS             1..451
                     /locus_tag="BL169_00001465"
                     /coded_by="MPYM04000004.1:17126..18481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_004591417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
ORIGIN      
        1 mtkttidiqa finehpftry qwmilalcfi tvamdgfdta iigfiasdlv qewgveksal
       61 gpvmsaalvg lavgaltagp ladrigrkkv limsivvfgg fslltafats lnqltllrfl
      121 tglglgaamp naatlmseya perrrallvn lmfvgfpmgs slggflsawm iphygwqsvl
      181 vlggvmplll avalifllpe svrylvvkqh paqriaailr hiaplpktve fvlreagqvk
      241 eksaigvifs pryavgtvml cltyfmglli fylltswlpl liretgasms qasiitalfp
      301 lgggigvlil galmdkinpn kvvavgwllt gvfvclvgfs tsslalmgvm vfiagsimng
      361 aqssmpalaa gfyptqgrat gvawmlgigr fggilgafsg aflmqaqlsf etiftllaip
      421 aflsafalli kyrvsksvpa ttdearslqk a
//
Feature
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