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flavohemoglobin expression-modulating QEGLA motif protein [Stutzerimonas stutzeri]

GenBank: RRW31076.1

Identical Proteins FASTA Graphics 

LOCUS       RRW31076                 431 aa            linear   BCT 11-DEC-2018
DEFINITION  flavohemoglobin expression-modulating QEGLA motif protein
            [Stutzerimonas stutzeri].
ACCESSION   RRW31076
VERSION     RRW31076.1
DBLINK      BioProject: PRJNA497126
            BioSample: SAMN10249001
DBSOURCE    accession RHRP01000001.1
KEYWORDS    .
SOURCE      Stutzerimonas stutzeri (Pseudomonas stutzeri)
  ORGANISM  Stutzerimonas stutzeri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Stutzerimonas.
REFERENCE   1  (residues 1 to 431)
  AUTHORS   D'Souza,A.W., Potter,R.F., Wallace,M., Shupe,A., Patel,S., Sun,S.,
            Gul,D., Kwon,J.H., Andleeb,S., Burnham,C.-A.D. and Dantas,G.
  TITLE     Transmission dynamics of multidrug resistant bacteria on intensive
            care unit surfaces
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 431)
  AUTHORS   D'Souza,A.W., Potter,R.F., Wallace,M., Shupe,A., Patel,S., Sun,S.,
            Gul,D., Kwon,J.H., Andleeb,S., Burnham,C.-A.D. and Dantas,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2018) Computational and Systems Biology,
            Washington University in St. Louis School of Medicine, 660 South
            Euclid Avenue, St. Louis, MO 63110, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.11.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 28x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 11/09/2018 18:56:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 4,164
            CDS (total)                       :: 4,101
            Genes (coding)                    :: 4,008
            CDS (coding)                      :: 4,008
            Genes (RNA)                       :: 63
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 93
            Pseudo Genes (ambiguous residues) :: 0 of 93
            Pseudo Genes (frameshifted)       :: 40 of 93
            Pseudo Genes (incomplete)         :: 45 of 93
            Pseudo Genes (internal stop)      :: 16 of 93
            Pseudo Genes (multiple problems)  :: 6 of 93
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Stutzerimonas stutzeri"
                     /strain="PS_066"
                     /isolation_source="bedside light switch in hospital
                     intensive care unit"
                     /db_xref="taxon:316"
                     /geo_loc_name="Pakistan"
                     /collection_date="2016-03"
     Protein         1..431
                     /product="flavohemoglobin expression-modulating QEGLA
                     motif protein"
     Region          42..417
                     /region_name="DUF1704"
                     /note="Domain of unknown function (DUF1704); pfam08014"
                     /db_xref="CDD:429786"
     CDS             1..431
                     /locus_tag="EGJ47_00725"
                     /coded_by="complement(RHRP01000001.1:146091..147386)"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_252387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
ORIGIN      
        1 mnsrnnldey qtivrglsdr iveaqtpvrv ldavkwddat rqaffaakgr elpqidrayy
       61 egrplafdss akkqefqdie rditrqlgqf npvgqimrrm ckeyrmvirm leargtpdfg
      121 misqelygaa sdafhagdpt ladlglmlsd ylnniadrgd lrdepknlta pqavellqkr
      181 ldvvfgegeg virvfesdgi ladaaagady ikirsdalfn erdvralevh eglvhvgttl
      241 ngqnqpictf lakgppsstv tqeglailme viafasyptr lrkltnrtra ihmaeegadf
      301 levfaffreq gygddesysn asrvfrgstp aglpftkdls ylkgfimiyn yiqlavrkgq
      361 leqipllfcg kttledmrtl rqlvdegmvv ppkylppqfq dlnalsawmc fsnflnhlsl
      421 drieadyani l
//
Feature
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Reference sequence information

  • RefSeq protein
    See the reference protein sequence for flavohemoglobin expression-modulating QEGLA motif protein (WP_011913860.1).

More about the gene PszF2a_RS14200

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