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AMP-binding protein [Acinetobacter baumannii]

GenBank: RSG57712.1

Identical Proteins FASTA Graphics 

LOCUS       RSG57712                 547 aa            linear   BCT 12-DEC-2018
DEFINITION  AMP-binding protein [Acinetobacter baumannii].
ACCESSION   RSG57712
VERSION     RSG57712.1
DBLINK      BioProject: PRJNA497126
            BioSample: SAMN10248989
DBSOURCE    accession RHZL01000088.1
KEYWORDS    .
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 547)
  AUTHORS   D'Souza,A.W., Potter,R.F., Wallace,M., Shupe,A., Patel,S., Sun,S.,
            Gul,D., Kwon,J.H., Andleeb,S., Burnham,C.-A.D. and Dantas,G.
  TITLE     Transmission dynamics of multidrug resistant bacteria on intensive
            care unit surfaces
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 547)
  AUTHORS   D'Souza,A.W., Potter,R.F., Wallace,M., Shupe,A., Patel,S., Sun,S.,
            Gul,D., Kwon,J.H., Andleeb,S., Burnham,C.-A.D. and Dantas,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2018) Computational and Systems Biology,
            Washington University in St. Louis School of Medicine, 660 South
            Euclid Avenue, St. Louis, MO 63110, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.11.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 11x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 11/14/2018 02:46:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,945
            CDS (total)                       :: 3,877
            Genes (coding)                    :: 3,780
            CDS (coding)                      :: 3,780
            Genes (RNA)                       :: 68
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 97
            Pseudo Genes (ambiguous residues) :: 2 of 97
            Pseudo Genes (frameshifted)       :: 36 of 97
            Pseudo Genes (incomplete)         :: 37 of 97
            Pseudo Genes (internal stop)      :: 33 of 97
            Pseudo Genes (multiple problems)  :: 11 of 97
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Acinetobacter baumannii"
                     /strain="AB_107"
                     /isolation_source="alcohol foam dispenser in hospital
                     intensive care unit"
                     /db_xref="taxon:470"
                     /geo_loc_name="Pakistan"
                     /collection_date="2016-02"
     Protein         1..547
                     /product="AMP-binding protein"
     Region          58..535
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(191,194..199,201..202)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(194,311..312,333..338,418,430,433,444,527)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(194,234..235,283,285..286,289,311..312,333..338,418,
                     430,433,441..444,508)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(234,285..286,289,311,441..443,502,508)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
     CDS             1..547
                     /locus_tag="EGU40_18330"
                     /coded_by="complement(RHZL01000088.1:5505..7148)"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000853293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
ORIGIN      
        1 mktlaeayqq fdltrlieeq lvghpqaina yvecceryvg kyktaliweg kngqaehytf
       61 eqlaelsgkl anffkaqgiq agdciagllp rtpellitil atwrigaiyq plftafeaks
      121 idhrittaqt klivtndeqr pklntlnvpv ivtvhqtgll sehdfdfwqs lqryseqcep
      181 vnrsfdddfl mmftsgttgl aksvpvplka ilafkgymth avdlreedmf wnladpgway
      241 glyygitgpl slghgiimde rsfnvdqaie likkykvsnl tgsptafrmf fgfkekfdps
      301 ikqhlrvvss agepltpevv nwfkqdlevn ifdqygqtel gmvianhhal ehplkvgsag
      361 faipghrfav ldqnyqelpt ggvgilamds eqsplmwfkg yggnnrkafv gkyyltgdtv
      421 tlnehggidf vgradnvitt sgyrvgpfdv estlleceav lesavigkpd perteivkaf
      481 vvlkpayqac etlkdklqqy vrnrlsrhay pkeiefvdsl pkttsgkiqr gllkqqeiak
      541 mqqayas
//
Feature
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