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SmdA family multidrug ABC transporter permease/ATP-binding protein [Enterobacter bugandensis]

GenBank: RTM21001.1

Identical Proteins FASTA Graphics 

LOCUS       RTM21001                 590 aa            linear   BCT 29-JUL-2019
DEFINITION  SmdA family multidrug ABC transporter permease/ATP-binding protein
            [Enterobacter bugandensis].
ACCESSION   RTM21001
VERSION     RTM21001.1
DBLINK      BioProject: PRJNA415108
            BioSample: SAMN10525017
DBSOURCE    accession RXSW01000004.1
KEYWORDS    .
SOURCE      Enterobacter bugandensis
  ORGANISM  Enterobacter bugandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter.
REFERENCE   1  (residues 1 to 590)
  AUTHORS   Wei,L., Wu,W., Lin,J., Zhang,X., Feng,Y. and Zong,Z.
  TITLE     The Batch Genome Submission of Enterobacter spp. strains
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 590)
  AUTHORS   Wei,L., Wu,W., Lin,J., Zhang,X., Feng,Y. and Zong,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2018) Center of Infectious Diseases, West China
            Hospital, Sichuan University, Guoxuexiang 37, Chengdu, Sichuan
            610041, China
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/18/2018 23:50:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 4,589
            CDSs (total)                      :: 4,509
            Genes (coding)                    :: 4,446
            CDSs (with protein)               :: 4,446
            Genes (RNA)                       :: 80
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 33 of 63
            Pseudo Genes (incomplete)         :: 29 of 63
            Pseudo Genes (internal stop)      :: 22 of 63
            Pseudo Genes (multiple problems)  :: 18 of 63
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Enterobacter bugandensis"
                     /strain="WCHEB090996"
                     /host="Homo sapiens"
                     /db_xref="taxon:881260"
                     /geo_loc_name="China: Chengdu, Sichuan"
                     /collection_date="2016-10"
     Protein         1..590
                     /product="SmdA family multidrug ABC transporter
                     permease/ATP-binding protein"
     Region          35..590
                     /region_name="PRK10789"
                     /note="SmdA family multidrug ABC transporter
                     permease/ATP-binding protein"
                     /db_xref="CDD:182732"
     CDS             1..590
                     /locus_tag="EKO15_08920"
                     /coded_by="RXSW01000004.1:164259..166031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
ORIGIN      
        1 mrlfaqlswy frrewqrylg avalliiiai lqlippkvvg yvvdgvteqh yttarvlmwv
       61 gtlvltaviv yllryvwrvl lfgasyqlav elredfyrql srqhpefylr hrtgdliara
      121 tndvdrvvfa agegvltlvd slvmgcavli vmstqiswql tllallpmpi malainryge
      181 qlherfklaq aafsslndrt qesmtsirmi kafgledrqs alfaadaadt gaknmrvari
      241 darfdptiyv aigmanllai gggswmvvqg tltlgqltsf amylglmiwp mlalawmfni
      301 vergsaaysr iramlaeapv vndgseavpe grgvmnvdvr kfvypqtehp vlenvsftlr
      361 pgqmlgicgp tgsgkstvls llqrhfdvie gdirfhdipl anllldewrg rlavvsqtpf
      421 lfsdtvanni alghpsatqe eiervarlas vhddilrlpq gyetevgerg vmlsggqkqr
      481 isiarallln aeililddal savdgrtehq ilhnlrqwgd grtviisahr lsalteasei
      541 lvlqhghiaq rgqhetlaeq pgwyrdmyry qqleaaldda peqdqeatna
//
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