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NCBI Reference Sequence: XP_006243475.1
Identical Proteins FASTA Graphics
LOCUS XP_006243475 1749 aa linear ROD 22-FEB-2024 DEFINITION unconventional myosin-Vc isoform X1 [Rattus norvegicus]. ACCESSION XP_006243475 VERSION XP_006243475.1 DBLINK BioProject: PRJNA1074393 DBSOURCE REFSEQ: accession XM_006243413.4 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_086026) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_036323735.1-RS_2024_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/09/2024 ##Genome-Annotation-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..1749 /organism="Rattus norvegicus" /strain="BN/NHsdMcwi" /bio_material="RGD 61498" /db_xref="taxon:10116" /chromosome="8" /sex="male" /tissue_type="kidney, spleen, liver" /geo_loc_name="USA: Wisconsin, Milwaukee" /lat_lon="43.05 N 88.04 W" /collected_by="Rebecca Schilling, Melinda Dwinell" Protein 1..1749 /product="unconventional myosin-Vc isoform X1" /calculated_mol_wt=203014 Region 81..741 /region_name="MYSc_Myo5" /note="class V myosin, motor domain; cd01380" /db_xref="CDD:276831" Site order(109..117,161..168,207..217,435..440) /site_type="other" /note="ATP binding site [chemical binding]" /db_xref="CDD:276831" Site 109..117 /site_type="other" /note="purine-binding loop" /db_xref="CDD:276831" Site 161..168 /site_type="other" /note="P-loop" /db_xref="CDD:276831" Site 207..217 /site_type="other" /note="switch I region" /db_xref="CDD:276831" Site 435..443 /site_type="other" /note="switch II region" /db_xref="CDD:276831" Site order(464..475,478..487) /site_type="active" /note="relay loop [active]" /db_xref="CDD:276831" Site 674..684 /site_type="other" /note="SH1 helix" /db_xref="CDD:276831" Site order(695..705,726..741) /site_type="other" /note="converter subdomain" /db_xref="CDD:276831" Region 755..776 /region_name="IQ" /note="Calmodulin-binding motif; smart00015" /db_xref="CDD:197470" Region 831..851 /region_name="IQ" /note="IQ calmodulin-binding motif; pfam00612" /db_xref="CDD:459869" Region <850..>1385 /region_name="SMC_prok_B" /note="chromosome segregation protein SMC, common bacterial type; TIGR02168" /db_xref="CDD:274008" Region 1376..1743 /region_name="Myo5c_CBD" /note="Cargo binding domain of myosin 5C; cd15476" /db_xref="CDD:271260" CDS 1..1749 /gene="Myo5c" /coded_by="XM_006243413.4:136..5385" /db_xref="GeneID:315820" /db_xref="RGD:1309994" ORIGIN 1 mavaelyaqy nrvwipdpee vwksaeiakd yrvgdqvlrl lledgteldy pvdpgslppl 61 rnpdilvgen dltalsylhe pavlhnlrir faeskliyty sgiilvamnp ykqlpiygda 121 iihaysgqnm gdmdphifav aeeaykqmar nnrnqsiivs gesgagktvs aryamryfat 181 vsksssnahv eekvlasnpi teavgnaktt rndnssrfgk yteisfdern qiiganmrty 241 lleksrvvfq senernyhif yqlcasaqqs efkhlklgsa eefnytrmgg ntviegvddr 301 admaetqktf tllgfkkdfq mdvfkilaai lhlgnvqvtt vgnersavse ddshlkvfce 361 llgletikva qwlcnrkivt ssetvvkpmt rpqainarda lakkiyahlf dfiveqinqa 421 lhfsgkqhtf igvldiygfe tfdvnsfeqf cinyaneklq qqfnlhvfkl eqeeymkedi 481 pwtlidfydn qpvidlieak mgilelldee cllphgtden wlqklynnfv nknslfekpr 541 msnssfiiqh fadkveyqce gfleknrdtv ydmlvevlra skfhlcaaff qespvpsspf 601 gamitvksak qvikpntkhf rttvgnkfrs slfllmetln attphyvrci kpndeklpfe 661 fdskrivqql racgvletir isaqsypsrw tylefysryg vlmtqqelsl sdkkevckvv 721 lhrliqdsnq yqfgrtkiff ragqvaylek lrldklrqgc iviqkhvrgw lqrkkflrer 781 raaltiqqyf rgqqtvrkai tatalkeawa aiilqkhcrg ylvrnlyqli rvatitiqah 841 trgflarrry rkllqehkav ilqkyarawl arrrfqnirr fvlniqltyr vqrlqkkled 901 qnrenhglve kltslaalrv gdlekvqrle aelekaathr hsyeekgrry rdsmeerlsk 961 lqkhnaeles qreraeqslq erteelkekm dqltrqlfdd vqkeeqqrll leksfelktq 1021 ayekeieslr eeikalkder tqlhhqleeg rvtsdslkge varlskqakt isefekeiel 1081 lqaqkidvek hvqsqkremr ermsevtkql lesydiedvr srlsvedleh lnedgelwfa 1141 yeglkkatrv leshfqsqkd cyekeiegln fkvvhlsqei nhlqklfree tdinesirhe 1201 vtrltsenmm ipdfkqqise lerqkqdles rlkeqaekme gkqeepfshl nrgleeegrq 1261 gkaprpflra veaqsethpe gkerlvgkiq epqeaikfpk kqaeaeeeve silrqeasrl 1321 slenrdleee ldmkdrmirk lqdqvktltr tiekansvpl psgsreylgm leykkedetk 1381 liqnlildlk prgvvvnmip glpahilfmc vryadslnda nmlkslmnsa ingikhvvke 1441 hfedlemlsf wlsntchfln clkqysgeee fmkcnspqqn knclnnfdlt eyrqilsdva 1501 iriyhqfilv mennlqpiiv pgmleyeslq gisglkptgf rkrsssiddt daytmtsilq 1561 qlsyfystmc qngldpeivr qavkqlfyli gavtlnslll rkdmcscrkg mqircnisfl 1621 eewlkdknlq nslaketlep lsqaawllqv kkttdsdake isqcctslsa vqiikilnsy 1681 tpiddfekrv npsfvrkvqa llnnrgdssq lmldtkylfq vtfpftasph alemtqipss 1741 fklgflrrl //
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