U.S. flag

An official website of the United States government

globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X2 [Mus musculus]

NCBI Reference Sequence: XP_036016680.1

Identical Proteins FASTA Graphics 

LOCUS       XP_036016680             347 aa            linear   ROD 07-FEB-2024
DEFINITION  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X2
            [Mus musculus].
ACCESSION   XP_036016680
VERSION     XP_036016680.1
DBLINK      BioProject: PRJNA169
DBSOURCE    REFSEQ: accession XM_036160787.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Mus musculus"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     Protein         1..347
                     /product="globoside
                     alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X2"
                     /calculated_mol_wt=40371
     Region          60..347
                     /region_name="Glyco_transf_6"
                     /note="Glycosyltransferase family 6; pfam03414"
                     /db_xref="CDD:427285"
     Site            order(116..118,121,179,183,206..208,340,342,346)
                     /site_type="active"
                     /note="substrate binding site [active]"
                     /db_xref="CDD:133008"
     Site            order(116..118,121,206..208,228..231,240,259,295,298)
                     /site_type="active"
                     /db_xref="CDD:133008"
     CDS             1..347
                     /gene="Gbgt1"
                     /gene_synonym="Fgs; Fs"
                     /coded_by="XM_036160787.1:1240..2283"
                     /db_xref="GeneID:227671"
                     /db_xref="MGI:MGI:2449143"
ORIGIN      
        1 mtrprlaqgl affllggtgl wvlwkfikdw llvsyipyyl pcpeffnmkl pfrkekplqp
       61 vtqlqypqpk llehgptell tltpwlapiv segtfdpell ksmyqplnlt igvtvfavgk
      121 ytcfiqrfle saeeffmrgy qvhyylfthd ptavprvplg pgrllsiipi qgysrweeis
      181 mrrmetinkh iakrahkevd ylfcvdvdmv frnpwgpetl gdlvaaihpg yfavprrkfp
      241 yerrqvssaf vadnegdfyy ggalfggrva rvyeftrach mailadkans imaawqeesh
      301 lnrhfiwhkp skvlspeylw derkprprsl kmirfssvkk nanwlrt
//
Feature
Display: FASTA GenBank Help
Details

Supplemental Content

Change region shown

Customize view

Reference sequence information

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
External link. Please review our privacy policy.