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NCBI Reference Sequence: XP_038946998.1
Identical Proteins FASTA Graphics
LOCUS XP_038946998 1653 aa linear ROD 22-FEB-2024 DEFINITION receptor-type tyrosine-protein phosphatase V isoform X3 [Rattus norvegicus]. ACCESSION XP_038946998 VERSION XP_038946998.1 DBLINK BioProject: PRJNA1074393 DBSOURCE REFSEQ: accession XM_039091070.2 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_086031) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_036323735.1-RS_2024_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/09/2024 ##Genome-Annotation-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..1653 /organism="Rattus norvegicus" /strain="BN/NHsdMcwi" /bio_material="RGD 61498" /db_xref="taxon:10116" /chromosome="13" /sex="male" /tissue_type="kidney, spleen, liver" /geo_loc_name="USA: Wisconsin, Milwaukee" /lat_lon="43.05 N 88.04 W" /collected_by="Rebecca Schilling, Melinda Dwinell" Protein 1..1653 /product="receptor-type tyrosine-protein phosphatase V isoform X3" /calculated_mol_wt=180378 Region 49..110 /region_name="FN3" /note="Fibronectin type 3 domain; smart00060" /db_xref="CDD:214495" Region <97..>335 /region_name="FN3" /note="Fibronectin type 3 domain [General function prediction only]; COG3401" /db_xref="CDD:442628" Region <148..201 /region_name="fn3" /note="Fibronectin type III domain; pfam00041" /db_xref="CDD:394996" Region 377..>749 /region_name="FN3" /note="Fibronectin type 3 domain [General function prediction only]; COG3401" /db_xref="CDD:442628" Region 950..1011 /region_name="PTP_tm" /note="TM proximal of protein tyrosine phosphatase, receptor type J; pfam18861" /db_xref="CDD:465889" Region 1120..1349 /region_name="R-PTPc-V" /note="catalytic domain of receptor-type tyrosine-protein phosphatase V; cd14618" /db_xref="CDD:350466" Region 1419..1635 /region_name="PTP_DSP_cys" /note="cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily; cl28904" /db_xref="CDD:475123" CDS 1..1653 /gene="Ptprv" /gene_synonym="Esp" /coded_by="XM_039091070.2:325..5286" /db_xref="GeneID:64576" /db_xref="RGD:621123" ORIGIN 1 mrplillaal lwlqgflaed dacsslegsp drqgggplls vnvsshgkst slflswvaae 61 lggfdyalsl rsvnssgspe gqqlqahtne sgfefhglvp gsryqlkltv lrpcwqnvti 121 tltartaptv vrglqlhsag sparleasws dapgdqdsyq lllyhlesqt lacnvsvspd 181 tlsysfgdll pgtqyvlevi twagslhakt silqwtepvp pdhlalralg tsslqafwns 241 segatsfrlm ltdllggtnt tavirqgvst htflhlspgt phelkicasa gphqiwgpsa 301 tewtypsyps dlvltplrne lwaswkaglg ardgyvlkls gpmeststlg peecnavfpg 361 plppghytlq lkvlagpyda wvegstwlae saalprevpg arlwldglea skqpgrrall 421 ysddapgslg nisvpsgath vifcglvpga hyrvdiasst gdisqsisgy tsplppqsle 481 visrsspsdl tiawgpapgq legykvtwhq dgsqrspgdl vdlgpdtlsl tlkslvpgsc 541 ytvsawawag nlssdsqkih sctrpapptn lslgfahqpa alkaswyhpp ggrdafhlrl 601 yrlrpltles ekvlpreaqn fswaqltagc efqvqlstlw gsersssana tgwtppsapt 661 lvnvtsdapt qlqvswahvp ggrsryqvtl yqestrtats imgpkedgts flgltpgtky 721 kveviswagp lytaaanvsa wtyplipnel lvsmqagsav vnlawpsgpl gqgachaqls 781 daghlsweqp lklgqelfml rdltpghtis msvrcragpl qasthlvvls vepgpvedvl 841 chpeatylal nwtmpagdvd vclvvverlv pgggthfvfq vntsgdalll pnlmpttsyr 901 lsltvlgrns rwsravslvc stsaeawhpp elaeppqvel gtgmgvtvmr gmfgkddgqi 961 qwygiiatin mtlaqpsrea inytwfsvva fsrlntpeti lafsafsepr asislaiipl 1021 tvmlgavvgs ivivcavlcl lrwrclkgpr sekdgfskel mpynlwrthr pipihsfrqs 1081 yeaksahahq tffqefeelk evgkdqprle aehpdniikn ryphvlpydh srvrltqlpg 1141 ephsdyinan fipgyshtqe iiatqgplkk tledfwrlvw eqqvhviiml tvgmengrvl 1201 cehywpanst pvthghitih llaeepedew trrefqlqhg teqkqrrvkq lqfttwpdhs 1261 vpeapsslla fvelvqeqvq atqgkgpilv hcsagvgrtg tfvallrllr qleeekvadv 1321 fntvyilrlh rplmiqtlsq yiflhsclln kilegppdss dsgpisvmdf aqacakraan 1381 anagflkeyk llkqaikdgt gsllpppdyn qnsivsrrhs qeqfalveec pedsmleasl 1441 fpggpsgcdh vvltgsagpk elwemvwehd ahvlvslglp dtkekppdiw pvemqpivtd 1501 mvtvhrvses ntttgwpstl frvihgesgk erqvqclqfp csesgcelpa ntlltfldav 1561 gqccfrgksk kpgtllshss kntnqlgtfl ameqllqqag tertvdvfnv alkqsqacgl 1621 mtptleqyiy lynclnsall nglpragkwp apc //
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