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NCBI Reference Sequence: XP_054213051.1
Identical Proteins FASTA Graphics
LOCUS XP_054213051 821 aa linear PRI 26-AUG-2024 DEFINITION nucleotide-binding oligomerization domain-containing protein 1 isoform X8 [Homo sapiens]. ACCESSION XP_054213051 VERSION XP_054213051.1 DBLINK BioProject: PRJNA807723 DBSOURCE REFSEQ: accession XM_054357076.1 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_060931) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_009914755.1-RS_2024_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; RefSeqFE; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/23/2024 ##Genome-Annotation-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..821 /organism="Homo sapiens" /isolate="CHM13" /db_xref="taxon:9606" /chromosome="7" /sex="female" /cell_line="CHM13htert" /tissue_type="hydatidiform mole" /note="haploid cell line" Protein 1..821 /product="nucleotide-binding oligomerization domain-containing protein 1 isoform X8" /calculated_mol_wt=93142 Region 21..105 /region_name="CARD_NOD1_CARD4" /note="Caspase activation and recruitment domain similar to that found in NOD1; cd08324" /db_xref="CDD:260035" Site order(26,29..30,33..36,38..40,42,46,87,90..91,93..101, 103..104) /site_type="other" /note="homodimer interface [polypeptide binding]" /db_xref="CDD:260035" Region 190..>542 /region_name="NACHT" /note="Predicted NTPase, NACHT family domain [Signal transduction mechanisms]; COG5635" /db_xref="CDD:444362" Region 197..367 /region_name="NACHT" /note="NACHT domain; pfam05729" /db_xref="CDD:428606" Region 517..665 /region_name="NLRC4_HD2" /note="NLRC4 helical domain HD2; pfam17776" /db_xref="CDD:465499" Region <730..817 /region_name="RNA1" /note="Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis]; COG5238" /db_xref="CDD:444072" Region 730..757 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 758..785 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" CDS 1..821 /gene="NOD1" /gene_synonym="CARD4; CLR7.1; hNod1; NLRC1" /coded_by="XM_054357076.1:621..3086" /db_xref="GeneID:10392" /db_xref="HGNC:HGNC:16390" /db_xref="MIM:605980" ORIGIN 1 meeqghseme iipseshphi qllksnrell vthirntqcl vdnllkndyf saedaeivca 61 cptqpdkvrk ildlvqskge evsefflyll qqladayvdl rpwlleigfs pslltqskvv 121 vntdpvsryt qqlrhhlgrd skfvlcyaqk eellleeiym dtimelvgfs neslgslnsl 181 aclldhttgi lneqgetifi lgdagvgksm llqrlqslwa tgrldagvkf ffhfrcrmfs 241 cfkesdrlcl qdllfkhycy perdpeevfa fllrfphval ftfdgldelh sdldlsrvpd 301 sscpwepahp lvllanllsg kllkgaskll tartgievpr qflrkkvllr gfspshlray 361 arrmfperal qdrllsqlea npnlcslcsv plfcwiifrc fqhfraafeg spqlpdctmt 421 ltdvfllvte vhlnrmqpss lvqrntrspv etlhagrdtl cslgqvahrg mekslfvftq 481 eevqasglqe rdmqlgflra lpelgpggdq qsyeffhltl qafftafflv lddrvgtqel 541 lrffqewmpp agaattscyp pflpfqclqg sgparedlfk nkdhfqftnl flcgllskak 601 qkllrhlvpa aalrrkrkal wahlfsslrg ylkslprvqv esfnqvqamp tfiwmlrciy 661 etqsqkvgql aargicanyl kltycnacsa dcsalsfvlh hfpkrlaldl dnnnlndygv 721 relqpcfsrl tvlrlsvnqi tdggvkvlse eltkykivty lglynnqitd vgaryvtkil 781 deckglthlk lgknkitseg gkylalavkn sksisevgwg n //
Whole sequence Selected region from: to:
Conserved Domains
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