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cadherin-24 isoform X2 [Homo sapiens]

NCBI Reference Sequence: XP_054232580.1

Identical Proteins FASTA Graphics 

LOCUS       XP_054232580             472 aa            linear   PRI 26-AUG-2024
DEFINITION  cadherin-24 isoform X2 [Homo sapiens].
ACCESSION   XP_054232580
VERSION     XP_054232580.1
DBLINK      BioProject: PRJNA807723
DBSOURCE    REFSEQ: accession XM_054376605.1
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_060938) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_009914755.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Homo sapiens"
                     /isolate="CHM13"
                     /db_xref="taxon:9606"
                     /chromosome="14"
                     /sex="female"
                     /cell_line="CHM13htert"
                     /tissue_type="hydatidiform mole"
                     /note="haploid cell line"
     Protein         1..472
                     /product="cadherin-24 isoform X2"
                     /calculated_mol_wt=51237
     Site            order(56..57,108,110,142,144..145)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          70..148
                     /region_name="CA"
                     /note="Cadherin repeats; smart00112"
                     /db_xref="CDD:214520"
     Region          154..255
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(161..162,216,218,251,253..254)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          264..368
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          379..469
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     CDS             1..472
                     /gene="CDH24"
                     /gene_synonym="CDH11L"
                     /coded_by="XM_054376605.1:243..1661"
                     /db_xref="GeneID:64403"
                     /db_xref="HGNC:HGNC:14265"
                     /db_xref="MIM:618599"
ORIGIN      
        1 mwglvrllla wlggwgcmgr laaparawag srehpgpall rtrrswvwnq ffvieeyagp
       61 epvligklhs dvdrgegrtk ylltgegagt vfvideatgn ihvtksldre ekaqyvllaq
      121 avdrasnrpl eppsefiikv qdindnppif plgpyhatvp emsnvgtsvi qvtahdaddp
      181 sygnsaklvy tvldglpffs vdpqtgvvrt aipnmdretq eeflvviqak dmgghmggls
      241 gsttvtvtls dvndnppkfp qslyqfsvve tagpgtlvgr lraqdpdlgd nalmaysild
      301 gegseafsis tdlqgrdgll tvrkpldfes qrsysfrvea tntlidpayl rrgpfkdvas
      361 vrvavqdape ppaftqaayh ltvpenkapg tlvgqisaad ldspaspiry silphsdper
      421 cfsiqpeegt ihtaapldre arawhnltvl atelgtihlq ngfihliitt tl
//
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