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Items: 7

1.
new record, indexing in progress
Family Accession:
2.
new record, indexing in progress
Family Accession:
3.
new record, indexing in progress
Family Accession:
4.
new record, indexing in progress
Family Accession:
5.

sigma-70 family RNA polymerase sigma factor

sigma-70 family RNA polymerase sigma factor is an initiation factor that promotes the attachment of RNA polymerase to specific initiation sites and is then released; similar to Mycobacterium tuberculosis extracytoplasmic function (ECF) RNA polymerase sigma factor SigJ

Date:
2019-06-07
Family Accession:
11484432
Method:
Sparcle
6.

sigma-70 family RNA polymerase sigma factor

This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several PFAM models hit segments of these sequences including Sigma-70 region 2 (PF04542) and Sigma-70, region 4 (PF04545), but not always above their respective trusted cutoffs.

GO Terms:
Molecular Function:
DNA-binding transcription factor activity (GO:0003700)
Biological Process:
DNA-templated transcription initiation (GO:0006352)
Biological Process:
regulation of DNA-templated transcription (GO:0006355)
Molecular Function:
sigma factor activity (GO:0016987)
Date:
2024-06-27
Family Accession:
TIGR02937.1
Method:
HMM
7.

RNA polymerase sigma factor SigJ

Sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription

Gene:
sigJ
GO Terms:
Biological Process:
DNA-templated transcription initiation (GO:0006352)
Biological Process:
regulation of DNA-templated transcription (GO:0006355)
Molecular Function:
sigma factor activity (GO:0016987)
Date:
2021-08-05
Family Accession:
NF007214.0
Method:
HMM
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