Protein Family Models for Protein (Select 1098557541) - Protein Family Models

Select item 4309831.

This domain is associated to sensor histidine kinases and recognises citrate and TCA cycle intermediates, Ag(II), Zn(II), Mg(II) (Matilla et al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043). [1]. 27049771. Cache Domains That are Homologous to, but Different from PAS Domains Comprise the Largest Superfamily of Extracellular Sensors in Prokaryotes. Upadhyay AA, Fleetwood AD, Adebali O, Finn RD, Zhulin IB;. PLoS Comput Biol. 2016;12:e1004862. (from Pfam)

Date:: 2024-10-16

Family Accession:: NF028512.5
Method:: HMM

Select item 4267052.

cache domain-containing protein

Date:: 2024-08-14

Family Accession:: NF028511.5
Method:: HMM

Select item 4258673.

Cache 3/Cache 2 fusion domain-containing protein

The Cache_3-Cache_2 domain likely originated as a fusion of sCache_3 and sCache_2 domains. [1]. 27049771. Cache Domains That are Homologous to, but Different from PAS Domains Comprise the Largest Superfamily of Extracellular Sensors in Prokaryotes. Upadhyay AA, Fleetwood AD, Adebali O, Finn RD, Zhulin IB;. PLoS Comput Biol. 2016;12:e1004862. (from Pfam)

Date:: 2024-10-16

Family Accession:: NF028510.5
Method:: HMM

Select item 4118454.

HAMP domain-containing protein

GO Terms:

Biological Process:: signal transduction (GO:0007165)

Cellular Component:: membrane (GO:0016020)

Date:: 2024-08-14

Family Accession:: NF012876.5
Method:: HMM

Select item 4113025.

methyl-accepting chemotaxis protein

This domain is thought to transduce the signal to CheA since it is highly conserved in very diverse MCPs. [1]. 1601874. Sequence and characterization of Bacillus subtilis CheW. Hanlon DW, Marquez-Magana LM, Carpenter PB, Chamberlin MJ, Ordal GW;. J Biol Chem 1992;267:12055-12060. (from Pfam)

GO Terms:

Biological Process:: signal transduction (GO:0007165)

Cellular Component:: membrane (GO:0016020)

Date:: 2024-10-16

Family Accession:: NF012245.5
Method:: HMM

Select item 4087476.