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Links from Protein

Items: 13

1.

Cache 3/Cache 2 fusion domain-containing protein

The Cache_3-Cache_2 domain likely originated as a fusion of sCache_3 and sCache_2 domains. [1]. 27049771. Cache Domains That are Homologous to, but Different from PAS. Domains Comprise the Largest Superfamily of Extracellular. Sensors in Prokaryotes.. Upadhyay AA, Fleetwood AD, Adebali O, Finn RD, Zhulin IB;. PLoS Comput Biol. 2016;12:e1004862. (from Pfam)

Date:
2024-08-14

Family Accession:
NF028510.5
Method:
HMM

2.

cache domain-containing protein

Double cache domain 1 covers the last three strands from the membrane distal PAS-like domain, the first two strands of the membrane proximal domain, and the connecting elements between the two domains [2]. This domain when present in chemoreceptors recognise several signals such as proteinogenic amino acids, GABA, Histamine and polyamines, decanoic acid, Autoinducer-2, purine derivatives, quaternary amines, citrate and taurine, among others. When associated with histidine kinases, it recognises C3/C4-dicarboxylic acids, Spermine, guanosine and Autoinducer-2 (Mantilla et al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1 https://doi.org/10.1093/femsre/fuab043). [1]. 11084361. Cache - a signaling domain common to animal Ca(2+)-channel. subunits and a class of prokaryotic chemotaxis receptors.. Anantharaman V, Aravind L;. Trends Biochem Sci 2000;25:535-537.. [2]. 27049771. Cache Domains That are Homologous to, but Different from PAS. Domains Comprise the Largest Superfamily of Extracellular. Sensors in Prokaryotes.. Upadhyay AA, Fleetwood AD, Adebali O, Finn RD, Zhulin IB;. PLoS Comput Biol. 2016;12:e1004862. (from Pfam)

Date:
2024-08-14

Family Accession:
NF014763.5
Method:
HMM

3.

HAMP domain-containing protein

GO Terms:
Biological Process:
signal transduction (GO:0007165)
Cellular Component:
membrane (GO:0016020)
Date:
2024-08-14

Family Accession:
NF012876.5
Method:
HMM

4.

methyl-accepting chemotaxis protein

This domain is thought to transduce the signal to CheA since it is highly conserved in very diverse MCPs. [1]. 1601874. Sequence and characterization of Bacillus subtilis CheW.. Hanlon DW, Marquez-Magana LM, Carpenter PB, Chamberlin MJ, Ordal. GW;. J Biol Chem 1992;267:12055-12060. (from Pfam)

GO Terms:
Biological Process:
signal transduction (GO:0007165)
Cellular Component:
membrane (GO:0016020)
Date:
2024-08-14

Family Accession:
NF012245.5
Method:
HMM

5.
new record, indexing in progress
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6.
new record, indexing in progress
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7.
new record, indexing in progress
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8.
new record, indexing in progress
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9.
new record, indexing in progress
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10.
new record, indexing in progress
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11.
new record, indexing in progress
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12.
new record, indexing in progress
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13.

methyl-accepting chemotaxis protein

methyl-accepting chemotaxis protein (MCP) is a bacterial receptor that mediates chemotaxis to diverse signals, responding to changes in the concentration of attractants and repellents in the environment by altering swimming behavior

Date:
2024-04-29

Family Accession:
12036995
Method:
Sparcle

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