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    Links from Protein

    Items: 19

    1.

    AMP-binding enzyme C-terminal domain

    This is a small domain that is found C terminal to Pfam:PF00501. It has a central beta sheet core that is flanked by alpha helices. (from Pfam)

    Date:
    2024-08-14

    Family Accession:
    NF024591.5
    Method:
    HMM

    2.

    Formyl transferase, C-terminal domain

    GO Terms:
    Biological Process:
    biosynthetic process (GO:0009058)
    Molecular Function:
    hydroxymethyl-, formyl- and related transferase activity (GO:0016742)
    Date:
    2024-08-14

    Family Accession:
    NF014908.5
    Method:
    HMM

    3.

    formyltransferase family protein

    Many but not all members of this family are formyltransferases or deformylases, including hosphoribosylglycinamide formyltransferase 1 (EC 2.1.2.2), methionyl-tRNA formyltransferase (EC 2.1.2.9), and formyltetrahydrofolate deformylase (EC 3.5.1.1).

    GO Terms:
    Biological Process:
    biosynthetic process (GO:0009058)
    Molecular Function:
    hydroxymethyl-, formyl- and related transferase activity (GO:0016742)
    Date:
    2024-08-14

    Family Accession:
    NF012760.5
    Method:
    HMM

    4.

    phosphopantetheine-binding protein

    A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Swiss:P19828 has the attachment serine replaced by an alanine. (from Pfam)

    Date:
    2024-08-14

    Family Accession:
    NF012759.5
    Method:
    HMM

    5.

    LLM class flavin-dependent oxidoreductase

    GO Terms:
    Molecular Function:
    oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705)
    Date:
    2024-08-14

    Family Accession:
    NF012517.5
    Method:
    HMM

    6.

    AMP-binding protein

    Date:
    2024-08-14

    Family Accession:
    NF012711.5
    Method:
    HMM

    7.
    new record, indexing in progress
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    new record, indexing in progress
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    new record, indexing in progress
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    new record, indexing in progress
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    new record, indexing in progress
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    new record, indexing in progress
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    new record, indexing in progress
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    new record, indexing in progress
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    new record, indexing in progress
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    new record, indexing in progress
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    new record, indexing in progress
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    19.

    MupA/Atu3671 family FMN-dependent luciferase-like monooxygenase

    This HMM describes a subfamily within the bacterial luciferase-like monooxygenase (LLM) family that regularly occurs within large non-ribosomal protein synthases/polyketide synthases, but also as single domain proteins. The LLM family includes members that bind either FMN or F420, but FMN is much more likely in this case because many members are from species that lack F420 biosynthesis capability. An example single domain protein is the monooxygenase MupA (AAK28503.1) of mupirocin biosynthesis in Pseudomonas fluorescens NCIMB 10586. The monooxygenase MupA should be be confused with the mupirocin resistance protein from Staphylococcus aureus given the same gene symbol. Another example is Atu3671, found in a siderophore biosynthesis operon in Agrobacterium tumefaciens.

    GO Terms:
    Molecular Function:
    FMN binding (GO:0010181)
    Date:
    2023-11-14

    Family Accession:
    TIGR04020.1
    Method:
    HMM

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