Protein Family Models

This domain is found at the C-terminus of alpha galactosidase enzymes. [1]. 26330557. Crystal Structure and Mutational Analysis of. Isomalto-dextranase, a Member of Glycoside Hydrolase Family 27.. Okazawa Y, Miyazaki T, Yokoi G, Ishizaki Y, Nishikawa A,. Tonozuka T;. J Biol Chem. 2015;290:26339-26349. (from Pfam)

Date:

2024-08-14

Date:

2024-08-14

The English-language version of the first reference can be found on pages 388-399 of the above. This domain has been named NEW3 but its actual function is not known. It is found on proteins which are bacterial galactosidases [1]. The domain is associated with the NPCBM family, Pfam:PF08305, a novel putative carbohydrate binding module found at the N-terminus of glycosyl hydrolases. [1]. 15285616. [Phylogenetic analysis of alpha-galactosidases of the GH27. family].. Naumov DG;. Mol Biol (Mosk). 2004;38:463-476.. [2]. 16131397. GH97 is a new family of glycoside hydrolases, which is related. to the alpha-galactosidase superfamily.. Naumoff DG;. BMC Genomics. 2005;6:112. (from Pfam)

Date:

2024-08-14

This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins [1]. This domain has also been called the NEW2 domain [2]. NPCBM domains found in bacterial conflict systems are predicted to interact with invasive molecules and recruit downstream effectors [3]. [1]. 16212961. Analysis of glycoside hydrolase family 98: catalytic machinery,. mechanism and a novel putative carbohydrate binding module.. Rigden DJ;. FEBS Lett. 2005;579:5466-5472.. [2]. 15285616. [Phylogenetic analysis of alpha-galactosidases of the GH27. family].. Naumov DG;. Mol Biol (Mosk). 2004;38:463-476.. [3]. 34061031. Bacterial death and TRADD-N domains help define novel apoptosis. and immunity mechanisms shared by prokaryotes and metazoans.. Kaur G, Iyer LM, Burroughs AM, Aravind L;. Elife. 2021; [Epub ahead of print] (from Pfam)

Date:

2024-08-14