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Links from Protein

Items: 13

1.

Bacterial DNA polymerase III alpha subunit finger domain

Date:
2024-08-14

Family Accession:
NF036968.5
Method:
HMM

2.

Bacterial DNA polymerase III alpha NTPase domain

GO Terms:
Biological Process:
DNA replication (GO:0006260)
Molecular Function:
3'-5' exonuclease activity (GO:0008408)
Date:
2024-08-14

Family Accession:
NF019353.5
Method:
HMM

3.

PHP domain-containing protein

The PHP (Polymerase and Histidinol Phosphatase) domain is a putative phosphoesterase domain. [1]. 9685491. Phosphoesterase domains associated with DNA polymerases of diverse origins. Aravind L, Koonin EV;. Nucleic Acids Res 1998;26:3746-3752. (from Pfam)

GO Terms:
Molecular Function:
catalytic activity (GO:0003824)
Date:
2024-10-16

Family Accession:
NF014826.5
Method:
HMM

4.
new record, indexing in progress
Family Accession:
5.
new record, indexing in progress
Family Accession:
6.
new record, indexing in progress
Family Accession:
7.
new record, indexing in progress
Family Accession:
8.
new record, indexing in progress
Family Accession:
9.
new record, indexing in progress
Family Accession:
10.

intein N-terminal splicing region

This model is based on interated search results, starting with a curated collection of intein N-terminal splicing regions from InBase, the New England Biolabs Intein Database, as presented on its web site. It is designed to recognize inteins but not the related region of the sonic hedgehog protein.

GO Terms:
Biological Process:
intein-mediated protein splicing (GO:0016539)
Date:
2021-04-27

Family Accession:
TIGR01445.1
Method:
HMM

11.

PRK09532 family protein

PRK09532 family protein

Date:
2017-03-02

Family Accession:
11484329
Method:
Sparcle

12.

DNA polymerase III subunit alpha

All proteins in this family for which functions are known are DNA polymerases. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

Gene:
dnaE
GO Terms:
Molecular Function:
DNA-directed DNA polymerase activity (GO:0003887)
Biological Process:
DNA replication (GO:0006260)
Molecular Function:
3'-5' exonuclease activity (GO:0008408)
Cellular Component:
DNA polymerase III complex (GO:0009360)
Date:
2024-06-04

Family Accession:
TIGR00594.1
Method:
HMM

13.

DNA polymerase III subunit alpha

Main replicative polymerase

Date:
2021-03-12

Family Accession:
NF007079.0
Method:
HMM

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