Protein Family Models for Protein (Select 2550912454) - Protein Family Models

Select item 4236901.

Acyl-CoA dehydrogenase C-terminal domain-containing protein

This domain family is found in bacteria, and is approximately 110 amino acids in length. The family is found in association with Pfam:PF02770, Pfam:PF00441, Pfam:PF02771. There is a conserved ARRL sequence motif. The C terminal domain is an alpha helical domain. The flavin ring of Acyl-CoA dehydrogenase is buried in the crevice between the two alpha helical domains and the beta-sheet domain of one subunit, and the adenosine pyrophosphate moiety is stretched into the subunit junction of a neighbouring subunit, composed of two C terminal domains. [1]. 8356049. Crystal structures of medium-chain acyl-CoA dehydrogenase from pig liver mitochondria with and without substrate. Kim JJ, Wang M, Paschke R;. Proc Natl Acad Sci U S A 1993;90:7523-7527. (from Pfam)

Date:: 2024-10-16

Family Accession:: NF023607.5
Method:: HMM

Select item 4169572.

Acyl-CoA dehydrogenase, C-terminal domain

Date:: 2024-08-14

Family Accession:: NF019640.5
Method:: HMM

Select item 4129893.

acyl-CoA dehydrogenase family protein

The N-terminal domain of Acyl-CoA dehydrogenase is an all-alpha domain. [1]. 7857927. Three-dimensional structure of butyryl-CoA dehydrogenase from Megasphaera elsdenii. Djordjevic S, Pace CP, Stankovich MT, Kim JJ;. Biochemistry. 1995;34:2163-2171. [2]. 8356049. Crystal structures of medium-chain acyl-CoA dehydrogenase from pig liver mitochondria with and without substrate. Kim JJ, Wang M, Paschke R;. Proc Natl Acad Sci U S A 1993;90:7523-7527. (from Pfam)

GO Terms:

Molecular Function:: oxidoreductase activity, acting on the CH-CH group of donors (GO:0016627)

Molecular Function:: flavin adenine dinucleotide binding (GO:0050660)

Date:: 2024-10-16

Family Accession:: NF014790.5
Method:: HMM

Select item 4129444.

acyl-CoA dehydrogenase family protein

Central domain of Acyl-CoA dehydrogenase has a beta-barrel fold. [1]. 7857927. Three-dimensional structure of butyryl-CoA dehydrogenase from Megasphaera elsdenii. Djordjevic S, Pace CP, Stankovich MT, Kim JJ;. Biochemistry. 1995;34:2163-2171. [2]. 8356049. Crystal structures of medium-chain acyl-CoA dehydrogenase from pig liver mitochondria with and without substrate. Kim JJ, Wang M, Paschke R;. Proc Natl Acad Sci U S A 1993;90:7523-7527. (from Pfam)

GO Terms:

Molecular Function:: oxidoreductase activity, acting on the CH-CH group of donors (GO:0016627)

Date:: 2024-10-16

Family Accession:: NF014789.5
Method:: HMM

Select item 4112125.

acyl-CoA dehydrogenase family protein

C-terminal domain of Acyl-CoA dehydrogenase is an all-alpha, four helical up-and-down bundle. [1]. 7857927. Three-dimensional structure of butyryl-CoA dehydrogenase from Megasphaera elsdenii. Djordjevic S, Pace CP, Stankovich MT, Kim JJ;. Biochemistry. 1995;34:2163-2171. [2]. 8356049. Crystal structures of medium-chain acyl-CoA dehydrogenase from pig liver mitochondria with and without substrate. Kim JJ, Wang M, Paschke R;. Proc Natl Acad Sci U S A 1993;90:7523-7527. [3]. 11514662. Sequence-structure analysis of FAD-containing proteins. Dym O, Eisenberg D;. Protein Sci 2001;10:1712-1728. (from Pfam)

GO Terms:

Molecular Function:: oxidoreductase activity, acting on the CH-CH group of donors (GO:0016627)

Date:: 2024-10-16

Family Accession:: NF012656.5
Method:: HMM

Select item 3998196.