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CENP-B N-terminal DNA-binding domain
Centromere Protein B (CENP-B) is a DNA-binding protein localised to the centromere. Within the N-terminal 125 residues, there is a DNA-binding region, which binds to a corresponding 17bp CENP-B box sequence. CENP-B dimers either bind two separate DNA molecules or alternatively, they may bind two CENP-B boxes on one DNA molecule, with the intervening stretch of DNA forming a loop structure. The CENP-B DNA-binding domain consists of two repeating domains, RP1 and RP2. This family corresponds to RP1 has been shown to consist of four helices in a helix-turn-helix structure [1]. [1]. 9451007. A helix-turn-helix structure unit in human centromere protein B. (CENP-B).. Iwahara J, Kigawa T, Kitagawa K, Masumoto H, Okazaki T, Yokoyama. S;. EMBO J 1998;17:827-837. (from Pfam)
IS3_IS150_ORF2.curated: hypothetical protein
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