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Links from Protein

Items: 8

1.

Fumarase C C-terminus

Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Kreb's cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit [1]. FumaraseC_C does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle. [1]. 8909293. Crystallographic studies of the catalytic and a second site in. fumarase C from Escherichia coli.. Weaver T, Banaszak L;. Biochemistry. 1996;35:13955-13965. (from Pfam)

GO Terms:
Biological Process:
tricarboxylic acid cycle (GO:0006099)
Molecular Function:
lyase activity (GO:0016829)
Date:
2024-08-14
Family Accession:
NF021900.5
Method:
HMM
2.

lyase family protein

Members of this family include fumarate hydratase, L-aspartate ammonia-lyase, argininosuccinate lyase, and adenylosuccinate lyase. All are classified as lyases, meaning these enzymes break a bond by an eliminating reaction that does not involve hydrolysis or oxidation.

Date:
2024-08-14
Family Accession:
NF012432.5
Method:
HMM
3.
new record, indexing in progress
Family Accession:
4.
new record, indexing in progress
Family Accession:
5.
new record, indexing in progress
Family Accession:
6.
new record, indexing in progress
Family Accession:
7.

aspartate ammonia-lyase

Catalyzes the formation of fumarate from aspartate

GO Terms:
Biological Process:
tricarboxylic acid cycle (GO:0006099)
Molecular Function:
lyase activity (GO:0016829)
Date:
2021-11-04
Family Accession:
NF008909.0
Method:
HMM
8.

class II fumarate hydratase

Putative fumarases from several species (Mycobacterium tuberculosis, Streptomyces coelicolor, Pseudomonas aeruginosa) branch deeply, although within the same branch of a phylogenetic tree rooted by aspartate ammonia-lyase sequences, and score between the trusted and noise cutoffs.

Gene:
fumC
GO Terms:
Molecular Function:
fumarate hydratase activity (GO:0004333)
Biological Process:
fumarate metabolic process (GO:0006106)
Cellular Component:
tricarboxylic acid cycle heteromeric enzyme complex (GO:0045239)
Date:
2024-05-29
Family Accession:
TIGR00979.1
Method:
HMM
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