Protein Family Models for Protein (Select 2740117930) - Protein Family Models

Select item 4244401.

Sigma-54 interaction domain

GO Terms:

Molecular Function:: ATP binding (GO:0005524)

Biological Process:: regulation of DNA-templated transcription (GO:0006355)

Molecular Function:: transcription factor binding (GO:0008134)

Date:: 2024-08-14

Family Accession:: NF025885.5
Method:: HMM

Select item 4169352.

AAA family ATPase

This Pfam entry includes some of the AAA proteins not detected by the Pfam:PF00004 model. [1]. 7646486. A 200-amino acid ATPase module in search of a basic function. Confalonieri F, Duguet M;. Bioessays 1995;17:639-650. A large extension of the family. [2]. 9927482. AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Neuwald AF, Aravind L, Spouge JL, Koonin EV;. Genome Res 1999;9:27-43. (from Pfam)

GO Terms:

Molecular Function:: ATP binding (GO:0005524)

Molecular Function:: ATP hydrolysis activity (GO:0016887)

Date:: 2024-10-16

Family Accession:: NF019348.5
Method:: HMM

Select item 4128933.

helix-turn-helix domain-containing protein

GO Terms:

Molecular Function:: sequence-specific DNA binding (GO:0043565)

Date:: 2024-08-14

Family Accession:: NF014950.5
Method:: HMM

Select item 4118794.

sigma 54-interacting transcriptional regulator

GO Terms:

Molecular Function:: ATP binding (GO:0005524)

Biological Process:: regulation of DNA-templated transcription (GO:0006355)

Molecular Function:: transcription factor binding (GO:0008134)

Date:: 2024-08-14

Family Accession:: NF012385.5
Method:: HMM

Select item 4037125.

new record, indexing in progress

Family Accession:

Select item 3968136.

new record, indexing in progress

Family Accession:

Select item 3932217.

new record, indexing in progress

Family Accession:

Select item 3900048.

new record, indexing in progress

Family Accession:

Select item 1784359.

phage shock protein operon transcriptional activator

Transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor

Gene:: pspF

Date:: 2020-10-26

Family Accession:: NF008622.0
Method:: HMM

Select item 5197210.

phage shock protein operon transcriptional activator

Members of this protein family are PspF, the sigma-54-dependent transcriptional activator of the phage shock protein (psp) operon, in Escherichia coli and numerous other species. The psp operon is induced by a number of stress conditions, including heat shock, ethanol, and filamentous phage infection. Changed com_name to adhere to TIGR role notes conventions. 09/15/06 - DMH

Gene:: pspF

GO Terms:

Cellular Component:: cytoplasm (GO:0005737)

Biological Process:: regulation of DNA-templated transcription (GO:0006355)

Molecular Function:: transcription regulator activity (GO:0140110)

Date:: 2021-05-12

Family Accession:: TIGR02974.1
Method:: HMM

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