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Links from Protein

Items: 4

1.

VpsR-related response regulator

VpsR appears superficially to be a response regulator, based on extension of its alignment to response regulators AlgB and NrtC all the way to the N-terminus. Instead of being a response regulator with a histidine kinase partner, the sigma-54-dependent transcription factor VpsR directly binds to cyclic-di-GMP. Its regulon includes genes for the biosynthesis of the biofilm matrix component called Vibrio polysaccharide (VPS). [1]. 11160103. VpsR, a Member of the Response Regulators of the Two-Component Regulatory Systems, Is Required for Expression of vps Biosynthesis Genes and EPS(ETr)-Associated Phenotypes in Vibrio cholerae O1 El Tor. Yildiz FH, Dolganov NA, Schoolnik GK;. J Bacteriol. 2001;183:1716-1726. (from Pfam)

Date:
2024-10-16
Family Accession:
NF039486.4
Method:
HMM
2.

Sigma-54 interaction domain

GO Terms:
Molecular Function:
ATP binding (GO:0005524)
Biological Process:
regulation of DNA-templated transcription (GO:0006355)
Molecular Function:
transcription factor binding (GO:0008134)
Date:
2024-08-14
Family Accession:
NF025885.5
Method:
HMM
3.

helix-turn-helix domain-containing protein

GO Terms:
Molecular Function:
sequence-specific DNA binding (GO:0043565)
Date:
2024-08-14
Family Accession:
NF014950.5
Method:
HMM
4.

sigma 54-interacting transcriptional regulator

GO Terms:
Molecular Function:
ATP binding (GO:0005524)
Biological Process:
regulation of DNA-templated transcription (GO:0006355)
Molecular Function:
transcription factor binding (GO:0008134)
Date:
2024-08-14
Family Accession:
NF012385.5
Method:
HMM
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