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Links from Protein

Items: 14

1.

ATP-binding protein

This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences [1]. The function of this protein is unknown, but it may perform a transposase function [2]. [1]. 7698671. Characterization and sequence of a novel insertion sequence, IS1162, from Pseudomonas fluorescens. Solinas F, Marconi AM, Ruzzi M, Zennaro E;. Gene 1995;155:77-82. [2]. 9141667. Characterization of IS1474, an insertion sequence of the IS21 family isolated from Pseudomonas alcaligenes NCIB 9867. Yeo CC, Poh CL;. FEMS Microbiol Lett 1997;149:257-263. (from Pfam)

GO Terms:
Molecular Function:
ATP binding (GO:0005524)
Date:
2024-10-16
Family Accession:
NF013828.5
Method:
HMM
2.

DnaA ATPase domain-containing protein

This entry represents the ATPAse domain of DnaA and similar proteins. [1]. 12234917. The structure of bacterial DnaA: implications for general mechanisms underlying DNA replication initiation. Erzberger JP, Pirruccello MM, Berger JM;. EMBO J. 2002;21:4763-4773. (from Pfam)

Date:
2024-10-16
Family Accession:
NF012529.5
Method:
HMM
3.

AAA family ATPase

AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. [1]. 7646486. A 200-amino acid ATPase module in search of a basic function. Confalonieri F, Duguet M;. Bioessays 1995;17:639-650. A large extension of the family. [2]. 9927482. AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Neuwald AF, Aravind L, Spouge JL, Koonin EV;. Genome Res 1999;9:27-43. (from Pfam)

GO Terms:
Molecular Function:
ATP binding (GO:0005524)
Molecular Function:
ATP hydrolysis activity (GO:0016887)
Date:
2024-10-16
Family Accession:
NF012234.5
Method:
HMM
4.
new record, indexing in progress
Family Accession:
5.
new record, indexing in progress
Family Accession:
6.
new record, indexing in progress
Family Accession:
7.
new record, indexing in progress
Family Accession:
8.
new record, indexing in progress
Family Accession:
9.
new record, indexing in progress
Family Accession:
10.

ATP-binding protein

ATP-binding protein with an AAA (ATPases Associated with various cellular Activities) domain; similar to the ATPase subunit of IS21, IstB, that assembles into a clamshell-shaped decamer that sandwiches DNA to facilitate efficient transposition

Date:
2022-11-18
Family Accession:
17609121
Method:
Sparcle
11.

IS21-like element helper ATPase IstB

This protein family model resembles PF01695, but was built to hit full-length AAA+ ATPases of IS21 family IS (insertion sequence) elements.

Gene:
istB
GO Terms:
Molecular Function:
ATP binding (GO:0005524)
Date:
2021-07-23
Family Accession:
NF038214.1
Method:
HMM
12.

IS21-like element IS21 family helper ATPase IstB

IstB, an AAA+ family ATPase, is a helper protein encoded adjacent to the transposase IstA. This BlastRule describes IstB of IS21 itself, the founding member of the family of IS21-like insertion sequences.

Gene:
istB
Date:
2022-10-11
Family Accession:
NBR012640
Method:
BlastRule
13.

IS21_ORF2.curated: hypothetical protein

Date:
2019-09-10
Family Accession:
NF012056.0
Method:
HMM
14.

IS21_combined.original: hypothetical protein

Date:
2019-09-10
Family Accession:
NF012057.0
Method:
HMM
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