Protein Family Models for Protein (Select 488418066) - Protein Family Models

Select item 4188541.

This family represents the N-terminus (approximately 120 residues) of bacterial primosomal DnaI proteins, although one family member appears to be of viral origin. DnaI is one of the components of the Bacillus subtilis replication restart primosome, and is required for the DnaB75-dependent loading of the DnaC helicase [1]. [1]. 11679082. DnaB, DnaD and DnaI proteins are components of the Bacillus subtilis replication restart primosome. Bruand C, Farache M, McGovern S, Ehrlich SD, Polard P;. Mol Microbiol 2001;42:245-255. (from Pfam)

Date:: 2024-10-16

Family Accession:: NF018969.5
Method:: HMM

Select item 4128722.

ATP-binding protein

This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences [1]. The function of this protein is unknown, but it may perform a transposase function [2]. [1]. 7698671. Characterization and sequence of a novel insertion sequence, IS1162, from Pseudomonas fluorescens. Solinas F, Marconi AM, Ruzzi M, Zennaro E;. Gene 1995;155:77-82. [2]. 9141667. Characterization of IS1474, an insertion sequence of the IS21 family isolated from Pseudomonas alcaligenes NCIB 9867. Yeo CC, Poh CL;. FEMS Microbiol Lett 1997;149:257-263. (from Pfam)

GO Terms:

Molecular Function:: ATP binding (GO:0005524)

Date:: 2024-10-16

Family Accession:: NF013828.5
Method:: HMM

Select item 4117633.

DnaA ATPase domain-containing protein

This entry represents the ATPAse domain of DnaA and similar proteins. [1]. 12234917. The structure of bacterial DnaA: implications for general mechanisms underlying DNA replication initiation. Erzberger JP, Pirruccello MM, Berger JM;. EMBO J. 2002;21:4763-4773. (from Pfam)

Date:: 2024-10-16

Family Accession:: NF012529.5
Method:: HMM

Select item 4116214.

AAA family ATPase

AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. [1]. 7646486. A 200-amino acid ATPase module in search of a basic function. Confalonieri F, Duguet M;. Bioessays 1995;17:639-650. A large extension of the family. [2]. 9927482. AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Neuwald AF, Aravind L, Spouge JL, Koonin EV;. Genome Res 1999;9:27-43. (from Pfam)

GO Terms:

Molecular Function:: ATP binding (GO:0005524)

Molecular Function:: ATP hydrolysis activity (GO:0016887)

Date:: 2024-10-16

Family Accession:: NF012234.5
Method:: HMM

Select item 3979975.