Protein Family Models for Protein (Select 490578128) - Protein Family Models

Select item 4223141.

substrate-binding domain-containing protein

This domain is found in a variety of bacterial periplasmic binding proteins. This domain recognises fructose (Matilla et. al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043). (from Pfam)

Date:: 2024-08-14

Family Accession:: NF024799.5
Method:: HMM

Select item 4118352.

Periplasmic binding proteins and sugar binding domain of LacI family

This family includes the periplasmic binding proteins, and the LacI family transcriptional regulators. The periplasmic binding proteins are the primary receptors for chemotaxis and transport of many sugar based solutes. The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain (Pfam:PF00356). [1]. 1583688. 1.7 A X-ray structure of the periplasmic ribose receptor from Escherichia coli. Mowbray SL, Cole LB;. J Mol Biol 1992;225:155-175. [2]. 8638105. Crystal structure of the lactose operon repressor and its complexes with DNA and inducer. Lewis M, Chang G, Horton NC, Kercher MA, Pace HC, Schumacher MA, Brennan RG, Lu P;. Science 1996;271:1247-1254. (from Pfam)

Date:: 2024-10-16

Family Accession:: NF012742.5
Method:: HMM

Select item 4019493.

new record, indexing in progress

Family Accession:

Select item 3900874.

new record, indexing in progress

Family Accession:

Select item 3670535.

multiple monosaccharide ABC transporter substrate-binding protein

Gene:: chvE

GO Terms:

Cellular Component:: ATP-binding cassette (ABC) transporter complex (GO:0043190)

Date:: 2023-09-26

Family Accession:: NF040907.2
Method:: HMM

Select item 3561786.

new record, indexing in progress

Family Accession:

Select item 3474617.

new record, indexing in progress

Family Accession:

Select item 3385928.

new record, indexing in progress

Family Accession:

Select item 3367679.

new record, indexing in progress

Family Accession:

Select item 29547710.

sugar ABC transporter substrate-binding protein ChvE

Gene:: chvE

Date:: 2020-09-15

Family Accession:: NBR012888
Method:: BlastRule

Select item 12413011.

sugar ABC transporter substrate-binding protein

sugar ABC transporter substrate-binding protein functions as the initial receptor in the ABC transport of sugar substrates; similar to Agrobacterium fabrum multiple sugar-binding periplasmic receptor ChvE

Date:: 2018-07-02

Family Accession:: 11467991
Method:: Sparcle

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