Protein Family Models for Protein (Select 492333648) - Protein Family Models

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Items: 5

Select item 4221101.

helix-turn-helix domain-containing protein

This domain is a DNA-binding helix-turn-helix domain. (from Pfam)

Date:: 2024-08-14

Family Accession:: NF024139.5
Method:: HMM

Select item 3993222.

new record, indexing in progress

Family Accession:

Select item 3575843.

new record, indexing in progress

Family Accession:

Select item 1427984.

excisionase family DNA-binding protein

An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This HMM represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This HMM identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (PF00376).

GO Terms:

Molecular Function:: DNA binding (GO:0003677)

Date:: 2021-04-27

Family Accession:: TIGR01764.1
Method:: HMM

Select item 425155.

helix-turn-helix transcriptional regulator

helix-turn-helix DNA-binding protein similar to Mycobacterium phage excisionase, which is necessary for the excision of prophage from the host genome by site-specific recombination at the attachment site