Protein Family Models for Protein (Select 493226315) - Protein Family Models

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Items: 5

Select item 4236631.

DUF4175 family protein

Date:: 2024-08-14

Family Accession:: NF025152.5
Method:: HMM

Select item 4011392.

new record, indexing in progress

Family Accession:

Select item 3583323.

new record, indexing in progress

Family Accession:

Select item 921064.

aProt_lowcomp family protein

Date:: 2017-03-02

Family Accession:: 11494144
Method:: Sparcle

Select item 487965.

TIGR02302 family protein

Members of this family are long (~850 residue) bacterial proteins from the alpha Proteobacteria. Each has 2-3 predicted transmembrane helices near the N-terminus and a long C-terminal region that includes stretches of Gln/Gly-rich low complexity sequence, predicted by TMHMM to be outside the membrane. In Bradyrhizobium japonicum, two tandem reading frames are together homologous the single members found in other species; the cutoffs scores are set low enough that the longer scores above the trusted cutoff and the shorter above the noise cutoff for this model.