Protein Family Models for Protein (Select 495775414) - Protein Family Models

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Links from Protein

Items: 6

Select item 4113641.

cold shock domain-containing protein

GO Terms:

Molecular Function:: nucleic acid binding (GO:0003676)

Date:: 2024-08-14

Family Accession:: NF012534.5
Method:: HMM

Select item 3882982.

new record, indexing in progress

Family Accession:

Select item 3464923.

new record, indexing in progress

Family Accession:

Select item 1737484.

cold shock-like protein CspD

Inhibits DNA replication at both initiation and elongation steps; stationary phase and starvation inducible

Gene:: cspD

Date:: 2020-10-26

Family Accession:: NF007405.0
Method:: HMM

Select item 1586885.

cold shock-like protein CspD

Gene:: cspD

Date:: 2020-10-26

Family Accession:: NF011574.0
Method:: HMM

Select item 499116.

cold shock domain-containing protein CspD

This HMM represents what appears to be a phylogenetically distinct clade, containing E. coli CspD (SP|P24245) and related proteobacterial proteins within the larger family of cold shock domain proteins described by Pfam HMM PF00313. The gene symbol cspD may have been used idependently for other subfamilies of cold shock domain proteins, such as for B. subtilis CspD. These proteins typically are shorter than 70 amino acids. In E. coli, CspD is a stress response protein induced in stationary phase. This homodimer binds single-stranded DNA and appears to inhibit DNA replication [1].