Protein Family Models for Protein (Select 498314440) - Protein Family Models

Select item 4180851.

This family represents the conserved barrel domain of the 'cupin' superfamily [1] ('cupa' is the Latin term for a small barrel). [1]. 9573603. Cupins: a new superfamily of functionally diverse proteins that include germins and plant storage proteins. Dunwell JM;. Biotechnol Genet Eng Rev 1998;15:1-32. (from Pfam)

Date:: 2024-10-16

Family Accession:: NF019498.5
Method:: HMM

Select item 4163332.

ectoine synthase

This family consists of several bacterial ectoine synthase proteins. The ectABC genes encode the diaminobutyric acid acetyltransferase (EctA), the diaminobutyric acid aminotransferase (EctB), and the ectoine synthase (EctC). Together these proteins constitute the ectoine biosynthetic pathway [1]. [1]. 11823218. Osmotically regulated synthesis of the compatible solute ectoine in Bacillus pasteurii and related Bacillus spp. Kuhlmann AU, Bremer E;. Appl Environ Microbiol 2002;68:772-783. (from Pfam)

GO Terms:

Biological Process:: ectoine biosynthetic process (GO:0019491)

Molecular Function:: ectoine synthase activity (GO:0033990)

Date:: 2024-10-16

Family Accession:: NF018088.5
Method:: HMM

Select item 4137313.

AraC family ligand binding domain-containing protein

This family represents the arabinose-binding and dimerisation domain of the bacterial gene regulatory protein AraC. The domain is found in conjunction with the helix-turn-helix (HTH) DNA-binding motif Pfam:PF00165. This domain is distantly related to the Cupin domain Pfam:PF00190. [1]. 9103202. Structural basis for ligand-regulated oligomerization of AraC. Soisson SM, MacDougall-Shackleton B, Schleif R, Wolberger C;. Science 1997;276:421-425. (from Pfam)

GO Terms:

Biological Process:: regulation of DNA-templated transcription (GO:0006355)

Date:: 2024-10-16

Family Accession:: NF014376.5
Method:: HMM

Select item 3949244.