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Links from Protein

Items: 19

1.

4Fe-4S dicluster domain-containing protein

This family includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. The structure of the domain is an alpha-antiparallel beta sandwich. (from Pfam)

Date:
2024-08-14
Family Accession:
NF024634.5
Method:
HMM
2.

4Fe-4S dicluster domain-containing protein

Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters. (from Pfam)

Date:
2024-08-14
Family Accession:
NF024644.5
Method:
HMM
3.

4Fe-4S binding domain

This superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. (from Pfam)

Date:
2024-08-14
Family Accession:
NF024210.5
Method:
HMM
4.

4Fe-4S binding domain

This superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. (from Pfam)

Date:
2024-08-14
Family Accession:
NF024246.5
Method:
HMM
5.

formate dehydrogenase N subunit beta transmembrane domain-containing protein

Members of this family are predominantly found in the beta subunit of formate dehydrogenase, and consist of a single transmembrane helix. They act as a transmembrane anchor, and allow for conduction of electrons within the protein [1]. [1]. 11884747. Molecular basis of proton motive force generation: structure of formate dehydrogenase-N. Jormakka M, Tornroth S, Byrne B, Iwata S;. Science. 2002;295:1863-1868. (from Pfam)

Date:
2024-10-16
Family Accession:
NF020725.5
Method:
HMM
6.

4Fe-4S binding protein

Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. (from Pfam)

Date:
2024-08-14
Family Accession:
NF012267.5
Method:
HMM
7.
new record, indexing in progress
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19.

formate dehydrogenase subunit beta

This model represents the beta subunit of the gamma-proteobacterial formate dehydrogenase. This subunit contains four 4Fe-4S clusters and is involved in transmitting electrons from the alpha subunit (TIGR01553) at the periplasmic space to the gamma subunit which spans the cytoplasmic membrane [1]. In addition to the gamma proteobacteria, a sequence from Aquifex aolicus falls within the scope of this model. This appears to be the case for the alpha, gamma and epsilon (accessory protein TIGR01562) chains as well.

Gene:
fdxH
GO Terms:
Molecular Function:
formate dehydrogenase (NAD+) activity (GO:0008863)
Biological Process:
formate oxidation (GO:0015944)
Cellular Component:
membrane (GO:0016020)
Molecular Function:
4 iron, 4 sulfur cluster binding (GO:0051539)
Date:
2024-06-11
Family Accession:
TIGR01582.1
Method:
HMM
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